Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0775 ATGCTGTACCATGTTGGATATTCCGGTGAGGTTCCTGAGATTCCGGGGTTTCTTTCTGAAGAAGCAAAGGATTTCTTGGAGAAGTGTCTTAGGAGGAATCCAAGAGAAAGATGGAGTGCTAGCCAATTGCTGAATCATCCATTTCTTGGGGAATTCAGTTCCAAAGATGGTGATTGTGTTCTTGGGGAATCCAATAGTTCATCATGGTCTCCTACTAGTATTCTTGATCAAGGATTTTGGAATTCTGTGGAGGAATCAGAATGCCCCATGCTGGGGATTTTGTTCAAACATGTTGTGTGCATTCCGCTTCGATAG 315 0.4317 MLYHVGYSGEVPEIPGFLSEEAKDFLEKCLRRNPRERWSASQLLNHPFLGEFSSKDGDCVLGESNSSSWSPTSILDQGFWNSVEESECPMLGILFKHVVCIPLR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0775 104 Gene3D Transferase(Phosphotransferase) domain 1 1 68 - -
Amo18g0775 104 PANTHER MAP KINASE KINASE KINASE 2 93 - -
Amo18g0775 104 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 93 - -
Amo18g0775 104 ProSiteProfiles Protein kinase domain profile. 1 49 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0775 104 SUPERFAMILY Protein kinase-like (PK-like) 10 52 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0775 Amo-Chr18 11115067 11115381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0775 1 83 MAP Kinase Kinase Kinase AT2G32510 59.036 1.38e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo18g0775 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0775 K20716 - pvu:PHAVU_005G115900g 127.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0775 18 11115067 11115381 Amo18g0775 18 11115067 11115381 ECH