Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0766 TATGCATGTCGTGATTCGCCGCCGGTGGATCTCCCAGTACGGCAGATCCCGGGGAGCTACGGATGGCCGTTGGTGGGTTCAATATCCGACAGGCTCGACTACTTCTGGTTCCAGAAGCCCGAGAGCTTCTTCAGGAAAAGAATTGAAAAGCACAAGAGCACAGTTTTCCGTACCAACGTTCCTCCCTCGTTCCCATTCTTCTTGAACGTTAACCCTAATGTCATCGCCGTCGTTGACGTTAAGTCATTCTCCCACCTCTTCGACATGGATCTCGTCGAGAAAAAGGATATTCTTCTCGGAGACTTTGCCCCCAGCCTCGCCTACACGGGAAACATGAGAGTCGGCGTTTACCAAGACCCTTCCGAACCTCAACATGGCATGGTGAAGAATTTCACAATGGACATCCTTAAACGGAGCTCAGGAATATGGGCATCTGAACTAGTATCAAACCTAGACAAAATGTGTGACAACCTCGAATCCACACTCTCCAATTCCTCTTCTGCGAGCTACCTTTTCCCTTTACAGCAGTTCCTCTTCACCTTCCTCACCAAGACCCTCTCCGGAGCCGACCCTTCCGTCGACGCCAAGATCGCGGACGGCGGCTACCTTATGTTTGACCGCTGGTTGGCCCTTCAGCTCCTGCCCACAGAGATCTTCCTCCACTCATACGCATACCCTTTCTTCCTTGTCAGTGGTGACTACAACAACCTCTACAACTTCATCAAACAACATGCTCGAGTTTGGGTTGACCGAAGAAGAACCATTCACAACCTTCTCTTCGTGCTTGGATTCAACGCATTCGGAGGCTTCTCCGTATTCCTCCCAAGCCTGATTGACGCCATAGCCACCGACACCACAGGCTTACAACGCAAACTGGCAAAGGAAGCAAGGGAAAATGGCGGGTCAACCCTCACCCTCAACTCGGTCAAAGACATGCCACTCATCAACTCCGTCGTCTACGAGGTGCTCCGCCTCAACCCACCGGTTCCCCTCCAGTACGCCCGCGCAAGAAAGGATTTCACACTGAGTTCACACGACTCGGCCTTCCGAGTCACCAAGGGCGAGTTACTCTGCGGCTACCAGAAACTTGTTATGCGGACCCACTTGTGTTTCAAGAACCGGAGAGTTTTAAGCCGGACCGGTTCGCTAACGTGGGGCCCAATTGTTGGACTACTTATTTTGGTCCAATGGGCCTCAGAGTGGGTCCGCACTTCGTCCAATAAGCAGTGCGCTGGAAAAGACATTGTGCCCCTTACGCTGCTTTGA 1266 0.5221 YACRDSPPVDLPVRQIPGSYGWPLVGSISDRLDYFWFQKPESFFRKRIEKHKSTVFRTNVPPSFPFFLNVNPNVIAVVDVKSFSHLFDMDLVEKKDILLGDFAPSLAYTGNMRVGVYQDPSEPQHGMVKNFTMDILKRSSGIWASELVSNLDKMCDNLESTLSNSSSASYLFPLQQFLFTFLTKTLSGADPSVDAKIADGGYLMFDRWLALQLLPTEIFLHSYAYPFFLVSGDYNNLYNFIKQHARVWVDRRRTIHNLLFVLGFNAFGGFSVFLPSLIDAIATDTTGLQRKLAKEARENGGSTLTLNSVKDMPLINSVVYEVLRLNPPVPLQYARARKDFTLSSHDSAFRVTKGELLCGYQKLVMRTHLCFKNRRVLSRTGSLTWGPIVGLLILVQWASEWVRTSSNKQCAGKDIVPLTLL* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0766 421 SUPERFAMILY Cytochrome P450 12 368 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0766 421 Pfam Cytochrome P450 288 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0766 421 Gene3D Cytochrome P450 11 373 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0766 421 PANTHER INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED 8 419 - -
Amo18g0766 421 PANTHER CYTOCHROME P450 26 8 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0766 Amo-Chr18 10795382 10799555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0766 89 419 Cytochrome P450 AT4G15440 48.634 1.18e-110 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0766 K10528 - gmx:100784395 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0766 18 10795382 10799555 Amo18g0766 18 10795382 10799555 ECH
Amo18g0766 18 10795382 10799555 Amo08g1217 08 20023984 20025460 hybridization