Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0755 ATGGATCATCTCTTGATCCGCAAGTTCCGCCACCGCTTACTTGCATGGCTTCACCGATCTCGTTCCGCTCAAAATTTGGATGCTGTAGGTAGGGTGTTCTTTGTGAGGAGAATTCCGTACAAGGATGTTAAAAGGGCAACTGATGGTTTCCAGAGAGTCATTTATAGCAACTCTGAGGTTACTGCATATGCTGCCAGGTTTGGTGAGGGTGGTGGTGGTGTGTTTTTGGTCAAGGAAGTGAAAGATTTTGGTCAACAAAATGATGTTTTCTGCAGACAGATTCAATTCTTGGGGCGCTTGCATCATCGCCATCTTCTCTCCCTCAAAGGGTTTTCTGTGGGAAAAGATAAGAGACTGCTCATATTCGATAACATAGAGAATGGAAGCTTAAAGGAGCATCTCAATGATCCCTTGAAGACTCCCTTAAATTGGAGGACCAGGTTGCAGATTGCTAATGAAGTTGTGGCAGCACTGGAATACTTGTTTCTTTTCAGTGATCCACCGGCATATCATGTCTCCATCAGCTCGAGCAATATTATGTTAGATGAGAACTTTGCAGCTAAACTATCAGATTTTGGCCTTCTTACTCCCAATGCAAACTCTGTCATGATGCCGAATTCAGGAGGTCCTTCTCTTTCAACAGAAAACAAAACTGAGGTACTTATTCTTGGTTACTTCACGTTAATGCGCTCACTGGCCTCATCTTGCATTTCAGATAGCATGAAGCAGAAGAGTTGCAAGATCATATTCCAACTCGGAGTGCTGATACTGGAATTGGTCACCGGCCAATCTTCAGAGATGGAAGGTTCAGATTTAATCCCATGGATCCAACAATCCCGATTTTACAATTCCATAGATAAGATGATAGACCCTGATCTTGGAAACAATTATGACTGTACGGAGCTTAAAAATCTTCTAGCAGTGGCAAAATTATGTATCAAATCAAGGGACAAGGCTACATTTACAATCTCTCAGTTATTTCGGTATCTGCAAAGGAAGATTGATATTTCCCATGACAAGAATATTTCCCTTGTGTGCATTCCTTCACGTCTCTTGCCTCTTGGAGAGGTAGTTTGGGTTACTGGCTTACTGCGCCTGATGCTCCTTTTGTTGAAATTGATCTCAGAAATGAAATGA 1137 0.423 MDHLLIRKFRHRLLAWLHRSRSAQNLDAVGRVFFVRRIPYKDVKRATDGFQRVIYSNSEVTAYAARFGEGGGGVFLVKEVKDFGQQNDVFCRQIQFLGRLHHRHLLSLKGFSVGKDKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANEVVAALEYLFLFSDPPAYHVSISSSNIMLDENFAAKLSDFGLLTPNANSVMMPNSGGPSLSTENKTEVLILGYFTLMRSLASSCISDSMKQKSCKIIFQLGVLILELVTGQSSEMEGSDLIPWIQQSRFYNSIDKMIDPDLGNNYDCTELKNLLAVAKLCIKSRDKATFTISQLFRYLQRKIDISHDKNISLVCIPSRLLPLGEVVWVTGLLRLMLLLLKLISEMK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0755 378 Pfam Protein tyrosine and serine/threonine kinase 76 198 IPR001245 GO:0004672|GO:0006468
Amo18g0755 378 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 231 335 - -
Amo18g0755 378 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 222 - -
Amo18g0755 378 ProSiteProfiles Protein kinase domain profile. 40 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0755 378 Gene3D Transferase(Phosphotransferase) domain 1 125 344 - -
Amo18g0755 378 SUPERFAMILY Protein kinase-like (PK-like) 30 302 IPR011009 -
Amo18g0755 378 Gene3D Phosphorylase Kinase; domain 1 14 123 - -
Amo18g0755 378 PANTHER OS01G0253100 PROTEIN 231 335 IPR045271 GO:0004714|GO:0006468
Amo18g0755 378 PANTHER OS01G0253100 PROTEIN 4 222 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0755 Amo-Chr18 10631432 10634408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0755 30 338 Receptor kinase-like Gene Family AT3G19300 36.190 7.17e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Amo18g0755 PK_Tyr_Ser-Thr 1.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0755 - - aprc:113853565 446.432