Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0752 ATGGGTGTCTCAGGGAAATGGATTAGATCATTGATTGGTCTAAAGAAGTCTGAAAAGGCAGAGTCTTCTGAGAAGGACCGAAATAAGGTTGGCAAGTCTCGGCATCAAAGAAAGCATTCGATTGAATTTGATAATGGTAAACTTCAAAATGAGCTTGATGATGATGTGACTCTGCCTATCAGAGATGATAATGATCGTTCAAACTCCGATGTCCATTATTCACCTTCTACTTCTCAACAAGCTCTTGATACTGCACATAATCACCAAATAATGAGGGAAGAATGGGCTGCCATTCGCATTCAAACAGCATTTCGAGGATTCCTGGCCAGAAGAGCACTAAGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACATTGCGTTGCATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTCCGCTTGGCATTGGAGAGTCAGAATGAACAACAGAAAGTTCAGCAGCAGCTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGCTGGTGTGACAGTGTGGGATCTGTAGAAGAAATCCAAGCTAAAATATTGAAGAGGCAGGAGGCTGCAGCTAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGACACCAGGCTGCTTCATCTGGATTTGAACCAGATAAAAGTAGCTGGGGCTGGAATTGGTTGGAAAGATGGATGGCTGTTCGTCCTTGGGAGAACCGTTTTGTTGACACTAATCTAAGGGAGGGAGCAATGGTACATGAAAATGGAGCAATGGATGGTAAAAATGGAACCAGTGCTAACAGCAAACAAATTCTGTCAAACAATCATCAAAAACCTGCAAGTCAGAAAGCTGGACCGGTTCTTTCCGATGGCTGTGGTTCTTCACCTGGTAAGTCAGCAGGCTTGCAGGAAGTAGTGAACATTCAGGCTGTTAAGCCAAATGGTGAAAATGCTATTGAAGAAGCCAATTCAAAACCCAGGATTGGGTCAAGATCTCGTAGTAATCCAAAGGAGAGAACCTCTCAAGGAGATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACAGCGCAGGGGGAGGTCCTGGGGCTCAAACAGCAAGACATCCTAATAGAACAAATGTCAAAGGAACACTCAGCGCCCAAAAGCTCGGTAGGGATAAACCTAAGGTCAATGGAAGAGGGGATGTAAATCTTACTCAGCCAGTTCCACAGCATGCAGGTATGTAA 1287 0.4514 MGVSGKWIRSLIGLKKSEKAESSEKDRNKVGKSRHQRKHSIEFDNGKLQNELDDDVTLPIRDDNDRSNSDVHYSPSTSQQALDTAHNHQIMREEWAAIRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQNEQQKVQQQLANEARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRHQAASSGFEPDKSSWGWNWLERWMAVRPWENRFVDTNLREGAMVHENGAMDGKNGTSANSKQILSNNHQKPASQKAGPVLSDGCGSSPGKSAGLQEVVNIQAVKPNGENAIEEANSKPRIGSRSRSNPKERTSQGDKQAKKRLSLPNSAGGGPGAQTARHPNRTNVKGTLSAQKLGRDKPKVNGRGDVNLTQPVPQHAGM* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0752 428 Gene3D - 94 135 - -
Amo18g0752 428 MobiDBLite consensus disorder prediction 70 85 - -
Amo18g0752 428 MobiDBLite consensus disorder prediction 17 85 - -
Amo18g0752 428 MobiDBLite consensus disorder prediction 351 366 - -
Amo18g0752 428 PANTHER IQ-DOMAIN 5-RELATED 2 382 - -
Amo18g0752 428 MobiDBLite consensus disorder prediction 37 69 - -
Amo18g0752 428 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Amo18g0752 428 SMART iq_5 92 114 IPR000048 GO:0005515
Amo18g0752 428 SMART iq_5 115 136 IPR000048 GO:0005515
Amo18g0752 428 MobiDBLite consensus disorder prediction 296 320 - -
Amo18g0752 428 MobiDBLite consensus disorder prediction 336 428 - -
Amo18g0752 428 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Amo18g0752 428 PANTHER IQ-DOMAIN 5-RELATED 2 382 - -
Amo18g0752 428 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0752 Amo-Chr18 10595253 10599888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0752 1 413 IQD Protein Family AT3G22190 56.398 2.92e-123 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0752 - - gmx:100787148 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0752 18 10595253 10599888 Amo18g0752 18 10595253 10599888 ECH