Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0748 ATGGATGTTGATTCCTCGATGGTGCAGGAGGCCGATCACGCTCCATCCGCCGGTGCTGCTGCTCCGGCGCCGGCTGCGGGAGAGGTAGAGCAGCTGGCCGAGTCACCGTCTTCAGGCAGTGGATCTCCGGCGGCGGCTCAGCTGCCTGTGCAGCAGCAGCAGCAGGCGCCTGCTCAGGTGCAGCAGAGTCCGGTGATAGGGCCGAGGCTGGCGCCAACTTATTCGGCGATGAACGCGATTATTGAGAAGAAGGAGGACGGGCCGGGTCCGCGGTGCGGCCACACATTGACGGCGGTGGCAGCCGTCGGAGAGGAGGGAGCTCCTGGGTACATTGGTCCCAGGCTGATATTGTTCGGTGGTGCCACTGCTCTTGAAGGCAATTCTGCGGCTTCAGGGACTCCGTCGTCTGCTGGAAATGCTGGAATACGTTTAGCTGGTGCTACTGCTGATGTCCACTGTTATGATGTCATTAATAATAAATGGTCTAGGATAACTCCCTATGGAGAGCCTCCAACTCCAAGGGCTGCACATGTGGCAACTGCTGTAGGGACCATGGTGGTTATTCAGGGTGGCATCGGTCCTGCTGGTTTGTCAGCAGAGGATCTTCATGTTCTTGATCTCACTCAGCAAATGCCCCGGTGGCATAGAGTATCTGTTCAAGGCCCTGGACCAGGGTCACGCTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTTATGGCTATTGGAGGAAATGATGGAAAGAGACCTTTGGCTGATGTGTGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGACTGCTTCTGCTCTGTGGAGGGAGAGATGCCAATAGTGTTCCATTGGCAAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGATGGGAATGGGCAATTGCCCCTGGTGTTTCTCCATCACCAAGATATCAGCATGCTGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGAAGGATGGTAGAAGACTCATCAAGTGTAGCAGTACTTGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTCACTAGTCCAAGAACCGGTAGATACAGTGCTGATGCAGCCGGAGGAGATGCTGCAGTTGAGTTGACTCGGCGTTGTAGGCATGCAGCTGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGAGGGGGAGTATTGCTAGATGACCTACTTGTTGCCGTAGATCTTGCTGCTTCAGAAACAACTACTGCCGCTTCACATGCAGCAGCGGCGGCTGCATCTAATGTACAAGCAGGCGGCTTACCTGGAAGATATGGATTTGATGAGAGGACGAGGCAACCAATGTCCGAAGCTGCTGCTGATGGTTCAGTTGTATTAGGAAATCCAGTCGCTCCCCCAATGAATGGAGATATGTATACAGATATCAGCACCGAAAATGCCATGCTTCAGGGTTCTCGGCGAACAAGCAAAGGAGTTGAGTATCTGGTCGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCTGCACTGGCTGCAGCCAAGGCACGGCAAGAGAATGGTGAAGTTGAATTGCCTGACAGAGACGGTGGAGCCGATGCTACCCCAAGTGGGAAACAGTCTTCCTTTATCAAACCTGATTCTGCAGGGTCAAATATCATTGCTTCTGGCGGTGTCCGGCTGCATCATAGAGCTGTGGTTGTTGCTGCGGAGACCGGTGGAGCATTAGGTGGTATGGTTAGACAGCTTTCAATTGATCAATTTGAAAATGAGGGCAGGCGAGTCAGTTATGGAACTCCAGAAAATGCAACTGCTGCTAGAAAATTATTAGACAGACAGATGTCTATCAATAGTGTGCCAAAAAAGGTCATAGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTTCGCCGGCAGTTTTTCTTAGATTGCAATGAAATTGCTGATCTTTGTGACAGTGCCGAGCGGATCTTTTCTAGTGAACCAAGTGTATTACGGCTTAAGGCTCCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTCATGCGGCTTTTTGATGAATATGGTTCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGACCGGGGACAACACAGTTTGGAAACTATATGCCTCCTCCTTGCTTTGAAGGTTGAATATCCCAAAAATGTACATCTAATTCGTGGAAACCATGAAGCTGCAGATATTAATGCTCTTTTTGGCTTCCGAATTGAGTGCATTGAAAGGATGGGTGAGAGAGATGGAATTTGGACATGGCATCGGGTGAACCGTCTGTTTAATTGGCTGCCTCTGGCGGCTTTAATTGAGAAAAAGATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCACGTGGAGCAGATTGAGAACATTCAACGTCCAATTCCAATGGAAGCAGGGTCAATTGTGCTGATGGATCTATTGTGGTCTGATCCTACAGAGAATGATAGTGTGGAAGGACTACGGCCAAATGCAAGAGGTCCTGGATTGGTTACTTTTGGGCCTGATCGTGTCATAGAATTTTGCAATAACAATGATCTTCAGCTGATTGTCCGTGCACATGAATGTGTCATGGATGGGTTTGAACGTTTCGCCCAAGGACATCTGATCACGCTTTTCTCAGCTACAAATTATTGTGGCACTGCAAACAATGCTGGGGCAATATTAGTTTTGGGTAGGGACCTTGTTGTGGTTCCTAAATTAATTCATCCATTACCACCAGCGATGTCTTCACCGGAGACATCACCTGAGCGGCATATTGAAGATACATGGATGCAGGAGTTGAATGCCAACAGACCACCAACGCCAACTAGAGGCCGTCCCCAAGTAACAAATGACCGAGTGCTCTGTACATAG 3003 0.4925 MDVDSSMVQEADHAPSAGAAAPAPAAGEVEQLAESPSSGSGSPAAAQLPVQQQQQAPAQVQQSPVIGPRLAPTYSAMNAIIEKKEDGPGPRCGHTLTAVAAVGEEGAPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVINNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQMPRWHRVSVQGPGPGSRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAVDLAASETTTAASHAAAAAASNVQAGGLPGRYGFDERTRQPMSEAAADGSVVLGNPVAPPMNGDMYTDISTENAMLQGSRRTSKGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDGGADATPSGKQSSFIKPDSAGSNIIASGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLRLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETICLLLALKVEYPKNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRVNRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVIEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAMSSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRVLCT* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0748 1000 SMART pp2a_7 671 955 IPR006186 GO:0016787
Amo18g0748 1000 Pfam Kelch motif 332 378 IPR011498 GO:0005515
Amo18g0748 1000 ProSitePatterns Serine/threonine specific protein phosphatases signature. 768 773 IPR006186 GO:0016787
Amo18g0748 1000 MobiDBLite consensus disorder prediction 546 575 - -
Amo18g0748 1000 CDD MPP_Bsu1_C 651 953 IPR041758 -
Amo18g0748 1000 Gene3D - 198 460 IPR015915 GO:0005515
Amo18g0748 1000 Gene3D - 72 197 IPR015915 GO:0005515
Amo18g0748 1000 PRINTS Serine/threonine phosphatase family signature 699 726 IPR006186 GO:0016787
Amo18g0748 1000 PRINTS Serine/threonine phosphatase family signature 734 761 IPR006186 GO:0016787
Amo18g0748 1000 PRINTS Serine/threonine phosphatase family signature 767 791 IPR006186 GO:0016787
Amo18g0748 1000 PRINTS Serine/threonine phosphatase family signature 805 831 IPR006186 GO:0016787
Amo18g0748 1000 PRINTS Serine/threonine phosphatase family signature 895 915 IPR006186 GO:0016787
Amo18g0748 1000 PRINTS Serine/threonine phosphatase family signature 917 933 IPR006186 GO:0016787
Amo18g0748 1000 PIRSF STPPP_BSU1 42 999 IPR012391 GO:0004721|GO:0009742
Amo18g0748 1000 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1000 - -
Amo18g0748 1000 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 1000 - -
Amo18g0748 1000 Gene3D - 635 977 IPR029052 -
Amo18g0748 1000 MobiDBLite consensus disorder prediction 1 64 - -
Amo18g0748 1000 MobiDBLite consensus disorder prediction 33 64 - -
Amo18g0748 1000 SUPERFAMILY Kelch motif 145 434 IPR015915 GO:0005515
Amo18g0748 1000 MobiDBLite consensus disorder prediction 978 993 - -
Amo18g0748 1000 SUPERFAMILY Metallo-dependent phosphatases 656 962 IPR029052 -
Amo18g0748 1000 MobiDBLite consensus disorder prediction 978 1000 - -
Amo18g0748 1000 Pfam Calcineurin-like phosphoesterase 699 906 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0748 Amo-Chr18 10550865 10563023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0748 663 898 Calmodulin-binding Proteins AT5G63870 29.412 4.52e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0748 - - gmx:100790406 1744.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0748 18 10550865 10563023 Amo18g0748 18 10550865 10563023 ECH
Amo18g0748 18 10550865 10563023 Amo13g1715 13 24401075 24412876 PCT
Amo13g1715 13 24401075 24412876 Amo18g0748 18 10550865 10563023 PCT