Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0743 ATGGACTGGTTTCAGGATCTTAGCCAGGTTTTTTGTCTCATTTCCAGTGTCTCAAATTTAGATACAAGTGCATATAATTCCATGAGGCAGAGCATAGAAGCTCTGTTTTCTGGCGCGGTCCTTGGAAGGAACCCTTCCAGATCACCGGCGCTGGCTATGAGAAAAGTATTTGGAACCAAGAGCTCTCTCCGCCTCCCCACCGCAACCCACTCCTCCGATGACTTCCGCTTCTATTTTGTAGCAGTGAACATAACATTCCGAAACACAGTAGGGCCAAGCAAGCACCAAGCAGTTGCCCTTGGAAGCGGAGCCGACTTATCAGCCTTCTACATGTGCAGTTTCGAGGGCTACCAAGACACACTCTACGCCCATTCCATGCGTCAATTCTACAGCGACTGCCACATTTATGGCACCGTTGATTTTATTTTCGGTAACGCCGCCGTAGTCTTCCAAAATTGCAACATCTTCCCCCGCCTCCCTATGACCGGCCAATTCAACTCAATTACCGCACAAGGCAGAACCGATCCCAACCAAAATACTGGAATCTCCATACACAACACAACGATTCGACCCGCTGACGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACGTACCTTGGTAGGCCGTGGAAGCAATACTCGAGGATGGTTTTATGGAAAATTAAAAAAAAAACATTCATTTAA 684 0.4781 MDWFQDLSQVFCLISSVSNLDTSAYNSMRQSIEALFSGAVLGRNPSRSPALAMRKVFGTKSSLRLPTATHSSDDFRFYFVAVNITFRNTVGPSKHQAVALGSGADLSAFYMCSFEGYQDTLYAHSMRQFYSDCHIYGTVDFIFGNAAVVFQNCNIFPRLPMTGQFNSITAQGRTDPNQNTGISIHNTTIRPADDLAPRVGVVKTYLGRPWKQYSRMVLWKIKKKTFI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0743 227 Pfam Pectinesterase 78 221 IPR000070 GO:0030599|GO:0042545
Amo18g0743 227 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 78 218 - -
Amo18g0743 227 SUPERFAMILY Pectin lyase-like 78 219 IPR011050 -
Amo18g0743 227 ProSitePatterns Pectinesterase signature 2. 135 144 IPR033131 -
Amo18g0743 227 PANTHER PECTINESTERASE 78 218 - -
Amo18g0743 227 Gene3D - 22 226 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0743 Amo-Chr18 10520270 10521701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0743 79 218 Carbohydrate Esterase AT4G02330 77.143 2.29e-76 239