Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0734 ATGGGGTTTTTGCTGAAAGAAGCTTTAAAGACTCTCTGCGGTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGATGCAACAATTCAAAACTATTGATCTGGGAAGAATGTTATTATGAACCATTGCCATGTTCTTTCCCTCAACCAACTTTTGGGAATGGAGAAGGCAGCTGGTTTTCTTCCGAGTCTCGCTCGTCTCAGATGGGGATCCAAGAGGAGGACAGAGTTTGTTCTTTGATTAACAAAATGACAGTGAATAATTCAGTCAATATCGCAGGTGAAGGAATAATTGGACGCGCTGCATTTACTGGCAACCATCAGTGGATTCTTTTCAACAATTTTAGTAGAGATGCATATCCACCTGAGGTATATGCTGAGATGCATCACCAACTTTCAGCTGGAATGCAGACTGTTGCAGTGATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGATCTTTCTTGCCACAATGTCAACCGCTACAGATAATGGAGAATATTGGGTTTGTAAATGATGTAAAGAGCTTGATCTTGCAACTTGGATGCATTCCCGGTGCCCTTCTATCGGAAGATTATTCAGGAAGTCCTTCCATTGGAAGAGCACTTGCTACTGGRGGCTTGCCTGTCTCTGTCYAACCACCTGSAATTCCCTCACATTGCATTCCATCAGTATCTAATGGCTCAAATGAGCAAAGTAACCCATCTCATGTTTCAAGGCCAACTGTTCAAACACTCTGTCCTATAAGGGGAGAAATGAATAACTTCCAAGGTTCAGTATTGACTCCCAAAACTCATAACCTGAGCCAGATATCAAATGGTTATTGCCAACCAAATGCTACTACATTGATTAAAACAAACTTTGCTGGCCGAAGTGAGAATAGGGTTGTGGAGGCTGAAATGATACCCTCAAGCAGAGGTTCATGCCTACAGCAGCCTTCTGTTTCATATAATGCAAGATCTGCATTCAATGGCTTATCCAGTTTCGGTCAATCAGTTGCAAGCGATTGCAATCTAAAATATATGGAGCAACAAATGATGTCAGTCCTTGGGAATCAAGGTCACAGTAATCCTAGTATAAATGCGTCAAGTACATTAAACATGTCTCTACTAAAGACAGATGGAGGCCATATACTTGATCACAATCAAAGTTCTAGCAGTGCTTCATTACTTGCTGGAATACCAATACATGGTGGGGTGAGTAGTCTTTTGAGGACAAGTCTTGTTACTGATTCTGGTTTAAGAACTCCAGATGTGTCRGTTGGTGATTTATCRGGAGCACAAGGGGGTGGGGTTGGAGTTAAAAGTGATGGTTCAAGTGAAGCAGGTGGTTCTTCTCTGMCTAATTTGTTCAGTCACTCAGGTTCCTTTACTGTGCCTCCACAAGGTTCTGATCAGAAGCTTCTCTCTGTAGATGTGAAGCATGTTCATGATGCTTTACCTTCAAAGCCTGTGACTACCGGAGYTCAAAGCCCTGATTTTGTCCAAGATTGTGTTAATAAACATGTTACTGGTCAATCTATGGTGAAGAATGTTAAACAAGAACAAGTTTGTGCTCAACCGTCATCAGGTGATGATCTGTTTGATATTCTAGGAGCAGATTTCAAAAACCAACTTCTGAGTGGAAACTGGGATAAGTTGTTTGCTGTTGGATCTGAATCTAATACAGAAAATATGGATAAAAAGCCAACATGTATGAATATGCAGGGTATGAACTCTGATTATTACTCTGCAAGTGAAGCAATATCAGAGAGTGACATATTTTCTGGGACAGGCACAGACCACCTCCTGGATGCTGTGGTTTCAAAGACCAAATCTGTCATGAAACAGAATTCTGATGACATGTCTTGCAGGACAACTTTGACAAGTAGTACCTGTTCAGTTCCCTCTCGTGCCTACAAGCCGGCTATGCCTGATCATATCCAGGGTGGGATGTTTGGTATTCCTAAGAGTGAGGGTAAAACAGGTGCTGTTGAAAATTCCATGAGGTCTGGATGTATTAAGGACGACGATGGAAAGTGTTCCCAAACTTCTTCTATGTTTGGGTCCCAACTTAGTTCATGGGTTGAAAATAGTAGCAAGCTTAAGCTTGAAAATAGTGTTTCGACTGGATACTCCAAGCGGCCTGATGAAGTTTGCAAATCGAATCGCAAAAGGCTTAAACCGGGAGAGAATCCTAGGCCTCGACCTAAGGATCGCCAAATGATTCAAGATCGTGTAAAAGAGTTACGGGAAATTGTGCCAAATGGAGCAAAGTGTAGCATAGATGCACTGCTGGAACGTACCATCAAGCATATGCTTTTTTTGCAGAGTGTGACAAAGCATGCTGACAAGCTGAAACAAACTGGGGATTCAAAGATATCTGCATCTGCATTAGCCTCTCAATTATAA 2394 0.4202 MGFLLKEALKTLCGRNQWSYAVFWKIGCNNSKLLIWEECYYEPLPCSFPQPTFGNGEGSWFSSESRSSQMGIQEEDRVCSLINKMTVNNSVNIAGEGIIGRAAFTGNHQWILFNNFSRDAYPPEVYAEMHHQLSAGMQTVAVIPVLPHGVVQLGSFLPQCQPLQIMENIGFVNDVKSLILQLGCIPGALLSEDYSGSPSIGRALATGGLPVSVXPPXIPSHCIPSVSNGSNEQSNPSHVSRPTVQTLCPIRGEMNNFQGSVLTPKTHNLSQISNGYCQPNATTLIKTNFAGRSENRVVEAEMIPSSRGSCLQQPSVSYNARSAFNGLSSFGQSVASDCNLKYMEQQMMSVLGNQGHSNPSINASSTLNMSLLKTDGGHILDHNQSSSSASLLAGIPIHGGVSSLLRTSLVTDSGLRTPDVSVGDLSGAQGGGVGVKSDGSSEAGGSSLXNLFSHSGSFTVPPQGSDQKLLSVDVKHVHDALPSKPVTTGXQSPDFVQDCVNKHVTGQSMVKNVKQEQVCAQPSSGDDLFDILGADFKNQLLSGNWDKLFAVGSESNTENMDKKPTCMNMQGMNSDYYSASEAISESDIFSGTGTDHLLDAVVSKTKSVMKQNSDDMSCRTTLTSSTCSVPSRAYKPAMPDHIQGGMFGIPKSEGKTGAVENSMRSGCIKDDDGKCSQTSSMFGSQLSSWVENSSKLKLENSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKISASALASQL* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0734 797 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 178 IPR025610 -
Amo18g0734 797 MobiDBLite consensus disorder prediction 711 738 - -
Amo18g0734 797 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 721 770 IPR011598 GO:0046983
Amo18g0734 797 MobiDBLite consensus disorder prediction 707 738 - -
Amo18g0734 797 MobiDBLite consensus disorder prediction 222 242 - -
Amo18g0734 797 CDD bHLH_AtLHW_like 725 788 - -
Amo18g0734 797 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 789 IPR043561 GO:0003700|GO:0006355
Amo18g0734 797 MobiDBLite consensus disorder prediction 638 659 - -
Amo18g0734 797 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 789 - -
Amo18g0734 797 MobiDBLite consensus disorder prediction 223 242 - -
Amo18g0734 797 MobiDBLite consensus disorder prediction 421 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0734 Amo-Chr18 10277472 10282900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0734 500 788 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 45.395 2.99e-56 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0734 - - gmx:100791138 956.822