Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0708 ATGGATGTTGATTCCTCGATGGTGCAGGAGGCCGATCACGCTCCATCCGCCGGTGCTGCTGCTCCGGCGCCGGCTGCGGGAGAGGTAGAGCAGCTGGCCGAGTCACCGTCTTCAGGCAGTGGATCTCCGGCGGCGGCTCAGCTGCCTGTGCAACAGCAGCAGCAGGCGCCTGCTCAGGTGCAGCAGAGTCCGGTGATAGGGCCGAGGCTGGCGCCAACTTATTCGGCGATGAACGCGATTATTGAGAAGAAGGAGGACGGGCCAGGTCCGCGGTGCGGCCACACATTGACGGCGGTGGCAGCCGTCGGAGAGGAGGGAGCTCCTGGGTACATTGGTCCCAGGCTGATATTGTTCGGTGGTGCCACTGCTCTTGAAGGCAATTCTGCGGCTTCAGGGACTCCGTCGTCTGCTGGAAATGCTGGAATACGTTTAGCTGGTGCCACTGCCGATGTCCACTGTTATGATGTCATGACTAATAAATGGTCTAGGATAACTCCCTATGGAGAGCCTCCAACTCCAAGGGCTGCACATGTGGCAACTGCTGTAGGGACCATGGTGGTTATTCAGGGTGGCATCGGTCCTGCTGGTTTGTCAGCAGAGGATCTTCATGTTCTTGATCTCACTCAGCAAATGCCCCGGTGGCATAGAGTATCTGTTCAAGGCCCTGGACCAGGGTCACGCTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTTATGGCTATTGGAGGAAATGATGGAAAGAGACCTTTGGCTGATGTGTGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGACTGCTTCTGCTCTGTGGAGGGAGAGATGCCAATAGTGTTCCATTGGCAAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGATGGGAATGGGCAATTGCCCCTGGTGTTTCTCCATCACCAAGATATCAGCATGCTGCGGTATTTGTTAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGAAGGATGGTAGAAGACTCATCAAGTGTAGCAGTACTTGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTCACTAGTCCAAGAACCGGTAGATACAGTGCTGATGCAGCCGGAGGAGATGCTGCAGTTGAGTTGACTCGGCGTTGTAGGCATGCAGCTGCTGCTGTTGGTGACCTAATTTTTATTTATGGTGGTTTACGAGGGGGAGTATTGCTAGATGACCTACTTGTTGCCGTAGATCTTGCTGCTTCAGAAACAACTACTGCCGCTTCACATGCAGCAGCGGCGGCTGCATCTAATGTACAAGCAGGCGGCTTACCTGGAAGATATGGATTTGATGAGAGGACGAGGCAACCAATGTCCGAAGCTGCTGCTGATGGTTCAGTTGTATTAGGAAATCCAGTCGCTCCCCCAATGAATGGAGATATGTATACAGATATCAGCACCGAAAATGCCATGCTTCAGGGTTCTCGGCGAACAAGCAAAGGAGTTGAGTATCTGGTCGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCTGCACTGGCTGCAGCCAAGGCACGGCAAGAGAATGGTGAAGTTGAATTGCCTGACAGAGACGGTGGAGCCGATGCTACCCCAAGTGGGAAACAGTCTTCCTTTATCAAACCTGATTCTGCAGGGTCAAATATCATTGCTTCTGGCGGTGTCCGGCTGCATCATAGAGCTGTGGTTGTTGCTGCGGAGACCGGTGGAGCATTAGGTGGTATGGTTAGACAGCTTTCAATTGATCAATTTGAAAATGAGGGCAGGCGAGTCAGTTATGGAACTCCAGAAAATGCAACTGCTGCTAGAAAATTATTAGACAGACAGATGTCTATCAATAGTGTGCCAAAAAAGGTCATAGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTTCGCCGGCAGTTTTTCTTAGATTGCAATGAAATTGCTGATCTTTGTGACAGTGCCGAGCGGATCTTTTCTAGTGAACCAAGTGTATTACGGCTTAAGGCTCCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTCATGCGGCTTTTTGATGAATATGGTTCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGACCGGGGACAACACAGTTTGGAAACTATATGCCTCCTCCTTGCTTTGAAGGTTGAATATCCCAAAAATGTACATCTAATTCGTGGAAACCATGAAGCTGCAGATATTAATGCTCTTTTTGGCTTCCGAATTGAGTGCATTGAAAGGATGGGTGAGAGAGATGGAATTTGGACATGGCATCGGGTGAACCGTCTGTTTAATTGGCTGCCTCTGGCGGCTTTAATTGAGAAAAAGATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCACGTGGAGCAGATTGAGAACATTCAACGTCCAATTCCAATGGAAGCAGGGTCAATTGTGCTGATGGATCTATTGTGGTCTGATCCTACAGAGAATGATAGTGTGGAAGGACTACGGCCAAATGCAAGAGGTCCTGGATTGGTTACTTTTGGGCCTGATCGTGTCATAGAATTTTGCAATAACAATGATCTTCAGCTGATTGTCCGTGCACATGAATGTGTCATGGATGGGTTTGAACGTTTCGCCCAAGGACATCTGATCACGCTTTTCTCAGCTACAAATTATTGTGGCACTGCAAACAATGCTGGGGCAATATTAGTTTTGGGTAGGGACCTTGTTGTGGTTCCTAAATTAATTCATCCATTACCACCAGCGATGTCTTCACCGGAGACATCACCTGAGCGGCATATTGAAGATACATGGATGCAGGAGTTGAATGCCAACAGACCACCAACGCCAACTAGAGGCCGTCCCCAAGTAACAAATGACCGAGGTTCGCTCGCTTGGATATAG 3009 0.4935 MDVDSSMVQEADHAPSAGAAAPAPAAGEVEQLAESPSSGSGSPAAAQLPVQQQQQAPAQVQQSPVIGPRLAPTYSAMNAIIEKKEDGPGPRCGHTLTAVAAVGEEGAPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVMTNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQMPRWHRVSVQGPGPGSRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAVDLAASETTTAASHAAAAAASNVQAGGLPGRYGFDERTRQPMSEAAADGSVVLGNPVAPPMNGDMYTDISTENAMLQGSRRTSKGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDGGADATPSGKQSSFIKPDSAGSNIIASGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLRLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETICLLLALKVEYPKNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRVNRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVIEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAMSSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRGSLAWI* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0708 1002 PIRSF STPPP_BSU1 42 1002 IPR012391 GO:0004721|GO:0009742
Amo18g0708 1002 SMART pp2a_7 671 955 IPR006186 GO:0016787
Amo18g0708 1002 MobiDBLite consensus disorder prediction 978 1002 - -
Amo18g0708 1002 Gene3D - 72 194 IPR015915 GO:0005515
Amo18g0708 1002 Gene3D - 195 310 IPR015915 GO:0005515
Amo18g0708 1002 SUPERFAMILY Kelch motif 146 434 IPR015915 GO:0005515
Amo18g0708 1002 ProSitePatterns Serine/threonine specific protein phosphatases signature. 768 773 IPR006186 GO:0016787
Amo18g0708 1002 MobiDBLite consensus disorder prediction 546 575 - -
Amo18g0708 1002 CDD MPP_Bsu1_C 651 953 IPR041758 -
Amo18g0708 1002 PRINTS Serine/threonine phosphatase family signature 699 726 IPR006186 GO:0016787
Amo18g0708 1002 PRINTS Serine/threonine phosphatase family signature 895 915 IPR006186 GO:0016787
Amo18g0708 1002 PRINTS Serine/threonine phosphatase family signature 734 761 IPR006186 GO:0016787
Amo18g0708 1002 PRINTS Serine/threonine phosphatase family signature 917 933 IPR006186 GO:0016787
Amo18g0708 1002 PRINTS Serine/threonine phosphatase family signature 805 831 IPR006186 GO:0016787
Amo18g0708 1002 PRINTS Serine/threonine phosphatase family signature 767 791 IPR006186 GO:0016787
Amo18g0708 1002 Gene3D - 311 463 IPR015915 GO:0005515
Amo18g0708 1002 Pfam Calcineurin-like phosphoesterase 699 906 IPR004843 GO:0016787
Amo18g0708 1002 Gene3D - 635 977 IPR029052 -
Amo18g0708 1002 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 996 - -
Amo18g0708 1002 MobiDBLite consensus disorder prediction 1 64 - -
Amo18g0708 1002 MobiDBLite consensus disorder prediction 33 64 - -
Amo18g0708 1002 MobiDBLite consensus disorder prediction 978 993 - -
Amo18g0708 1002 SUPERFAMILY Metallo-dependent phosphatases 656 962 IPR029052 -
Amo18g0708 1002 Pfam Kelch motif 332 378 IPR011498 GO:0005515
Amo18g0708 1002 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 996 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0708 Amo-Chr18 9748341 9760563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0708 663 898 Calmodulin-binding Proteins AT5G63870 29.412 5.07e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0708 - - gmx:100790406 1759.58