Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0693 CAGAGAGACAGAGACATTGGTTTTTCTCCTTCATGGGGTTCTGAGTTTAGTGTCAAAGTTCCTTCCTTGAGTACTTGGGGTTCTCTATTTTTTCTTCCTTATAGAGTAACAATGGAAGGTAGCCACATCATGGCAGTGTTGTTCTTTCTCTTCTTTGGCCTAATTATGAGAATGTGTTATGGTGACACAGACCCAAATGATCTCAAAGTTCTGAATTCTTTCAGAAAAGGGTTAGAGAATCCTGAGCTTCTGAAATGGCCGGAAGATGGAGATGATCCATGTGGCCCTCCTTCATGGCCTTATGTGTTCTGCAGTGGTGATAGAGTCACTCAGATTCAGGCCAAGAATCTTGGACTCAGAGGAACATTGCCTCCAAATTTCAATCAGCTCTCAGAACTCTACAACTTGGGCCTTCAAAGGAACAATCTCACTGGGATGTTGCCTAGTTTCAGTGGATTATCTAAGTTGGAATTTGCTTTCTTGGATTACAATGCATTTGAAGCAATCCCTTCAGATTTCTTCAACGGACTTACCAGCTTGAGGGTTTTGTCTTTGGAAGAAAATCCATTAAATGGAACTACTGGTTGGTCATTTCCTCTTGATTTGGAAAAATCAGTGCAACTAACCAATCTTTCTCTTGTTAATTGCAATTTGGTTGGACCGTTGCCGGATTTCCTAGGCACATTGCCTTCCCTAACGAACCTGAGGCTTTCCGGGAACAGGCTATCCGGTAAGATTCCGGAAACTTTTGCTCAATCTTCTATCCAGGTTCTATGGTTGAACAATCAAGAAGGTGAAGGGTTAACGGGTCCTATTGATGTTGTTTCTTCAATGATTTTCCTAAGACAGCTTTGGCTACATGGAAATCAGTTCAATGGGAGAATTCCACATGATATTGGAAACCTTACTTCCTTGCAAGAGCTCAACCTCAATAGTAATCAACTTGTTGGCTTGATTCCTGAATCCCTAGCAGAAATGGAACTTGAGTTACTGGTGTTGAACAATAACATGTTAATGGGTCCAATACCAGAATTTAAGGCTGCAAATGTTTCTTATAATAACAATTTCTTTTGTCAAATTAAGCCAGGGCATGAATGTGATCCTCAAGTTACTGCACTGCTAGATGTTCTGGATAATCTGAACTATCCATTGTTTCTCATTTCGGATTGGTCAGGCAACAATCCATGCACTGGAAGCACAGAGAGCACAGGGCCATGGTTCGGATTGAGCTGCAATTCCAACCACCAGGTATCTATAATCAATTTGCCACGGCACGAGCTCAACGGTACTCTTAGTCCCTCACTTGCTAAGTTAGATTCATTACTTGAAATTAGGCTAGAAGGAAATAACATAACTGGCATGGTTCCTAGTAATTTTTCTGAATTGAAATCTTTGAGGTTGTTTGATTTAAGTGACAACCATCTTGAGCCCCCATTGCCAAATTTTCGCGAAGATGTTAAGGTTGTTATTGTGGGAAACCCTCTTCTTACTACTGAAAGTGGAGGAATGTCTCTGCCGCCTGAAAATTCACATCCTTCTCCAGACAACCTGTCACCCCCTTCATCCTCCTCTCATAAGGCACATGATCCCAATATGAATTCAAGTTCAAGTCAATCTAAACTGGATCATTCCAAAAGATTCAAGACAGTGGCAATTGTGTCTGGAATTACAGTCTTTGTAGTTGCTGTTCCTTTGGTTGTTTTCCTCTTCATTTGTTCCATGAAGAAGAAAAAGGCCTCCTTGGATGCTCCAAGTTCCATTGTGGTGCACCCGAGAGATCCATCCAATCGGGATAATGTGGTTAAAGTCACAGTCTCAGATACCACTACTGGAAGCTTATCAACTAAGACTGGGACAAGTTCTCTGAGTAACATTAGTGGTGAGACTCAAAACTCTCATATAATTGAGGCTGGAAACCTTGTCATTTCGGTTCAAGTCCTACGCAAGGTTACCAACAATTTCTCTTCAGAAAATGAGCTAGGCCGTGGAGGGTTTGGAACTGTGTACAAGGGTGAACTTGAAGATGGGACTAAAATAGCAGTGAAGAGAATGGAGCATGGTGTTATCAGCAGCAAGGCGCTGGAGGAGTTCGAAGCTGAAATCGCTGTTCTTTCAAAGGTTCGTCACAGGCATTTGGTATCTCTTTTGGGGTATTCCATTGGAGGCAATGAGAGACTTTTGGTTTATGAATATATGCCTCTTGGTGCTCTTAGCCAACATCTTTTCCATTGGAAAAACTTGAAATTGAAACCATTGTCTTTGTCACAAAGGCTTGCAATAGCTCTAGATGTTGCTAGAGGGATCGAATACCTTCATGGTCTTGCCTGCCAGACCTTCATCCATAGAGACCTCAAGTCTTCTAATATTCTACTTGGTGATGATTTCCACGCAAAAGTATCGGATTTTGGTCTTGTTAAGCTTGCTCCGGATGGCGAAAAATCTGTGGCAACCAAGCTTGCTGGAACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACTAAAGTTGATGTGTTCAGCTACGGGGTGGTCCTGATGGAACTACTGACTGGATTAACAGCGCTTGATGAGAGCCGCCCGGAGGAAAGACGATATCTAGCAGAATGGTTTTGGCGAATCAAATCAAACAAAGAAAAGCTCATGGCTGCCATTGATCCAGCTTTGGAAGCAACTGACGAGGCTTTCGAGAGCATATCCATTGTATCTGAACTCGCTGGACACTGCACTGCAAGGGAGGCACACCACCGGCCAGATATGAGTCATGTAGTGAATGTACTCGTGGCATTGGTTGAGAAATGGAAACCGGTTGATGATGAGTTAGATTACGACTCTGGTATTGACTACAGTAGACCGCTCCCACAAATGCTGAAGATTTGGAAGGAAGCAGAGAGCAATGAATTTAGCTATGGCGCCAGTACTGAAAACAGTAGAGGAAGTATAGCAGCCAAGCCTTCTGGTTTTGCTGATTCTTTTACCTCTGCTGATGCTAGATGA 3006 0.4271 QRDRDIGFSPSWGSEFSVKVPSLSTWGSLFFLPYRVTMEGSHIMAVLFFLFFGLIMRMCYGDTDPNDLKVLNSFRKGLENPELLKWPEDGDDPCGPPSWPYVFCSGDRVTQIQAKNLGLRGTLPPNFNQLSELYNLGLQRNNLTGMLPSFSGLSKLEFAFLDYNAFEAIPSDFFNGLTSLRVLSLEENPLNGTTGWSFPLDLEKSVQLTNLSLVNCNLVGPLPDFLGTLPSLTNLRLSGNRLSGKIPETFAQSSIQVLWLNNQEGEGLTGPIDVVSSMIFLRQLWLHGNQFNGRIPHDIGNLTSLQELNLNSNQLVGLIPESLAEMELELLVLNNNMLMGPIPEFKAANVSYNNNFFCQIKPGHECDPQVTALLDVLDNLNYPLFLISDWSGNNPCTGSTESTGPWFGLSCNSNHQVSIINLPRHELNGTLSPSLAKLDSLLEIRLEGNNITGMVPSNFSELKSLRLFDLSDNHLEPPLPNFREDVKVVIVGNPLLTTESGGMSLPPENSHPSPDNLSPPSSSSHKAHDPNMNSSSSQSKLDHSKRFKTVAIVSGITVFVVAVPLVVFLFICSMKKKKASLDAPSSIVVHPRDPSNRDNVVKVTVSDTTTGSLSTKTGTSSLSNISGETQNSHIIEAGNLVISVQVLRKVTNNFSSENELGRGGFGTVYKGELEDGTKIAVKRMEHGVISSKALEEFEAEIAVLSKVRHRHLVSLLGYSIGGNERLLVYEYMPLGALSQHLFHWKNLKLKPLSLSQRLAIALDVARGIEYLHGLACQTFIHRDLKSSNILLGDDFHAKVSDFGLVKLAPDGEKSVATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLTALDESRPEERRYLAEWFWRIKSNKEKLMAAIDPALEATDEAFESISIVSELAGHCTAREAHHRPDMSHVVNVLVALVEKWKPVDDELDYDSGIDYSRPLPQMLKIWKEAESNEFSYGASTENSRGSIAAKPSGFADSFTSADAR* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0693 1001 SMART serkin_6 654 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0693 1001 PANTHER OSJNBA0070M12.3 PROTEIN 44 1001 - -
Amo18g0693 1001 Gene3D Transferase(Phosphotransferase) domain 1 732 948 - -
Amo18g0693 1001 MobiDBLite consensus disorder prediction 499 541 - -
Amo18g0693 1001 SUPERFAMILY L domain-like 63 346 - -
Amo18g0693 1001 ProSiteProfiles Protein kinase domain profile. 654 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0693 1001 SUPERFAMILY L domain-like 368 482 - -
Amo18g0693 1001 Pfam Protein tyrosine and serine/threonine kinase 657 930 IPR001245 GO:0004672|GO:0006468
Amo18g0693 1001 SUPERFAMILY Protein kinase-like (PK-like) 629 938 IPR011009 -
Amo18g0693 1001 Gene3D Ribonuclease Inhibitor 368 500 IPR032675 -
Amo18g0693 1001 MobiDBLite consensus disorder prediction 499 540 - -
Amo18g0693 1001 Pfam Leucine rich repeat N-terminal domain 65 105 IPR013210 -
Amo18g0693 1001 Pfam Leucine rich repeat N-terminal domain 367 412 IPR013210 -
Amo18g0693 1001 SMART LRR_typ_2 229 252 IPR003591 -
Amo18g0693 1001 SMART LRR_typ_2 153 176 IPR003591 -
Amo18g0693 1001 SMART LRR_typ_2 302 325 IPR003591 -
Amo18g0693 1001 SMART LRR_typ_2 177 200 IPR003591 -
Amo18g0693 1001 SMART LRR_typ_2 130 152 IPR003591 -
Amo18g0693 1001 SMART LRR_typ_2 438 461 IPR003591 -
Amo18g0693 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Amo18g0693 1001 PANTHER OSJNBA0070M12.3 PROTEIN 44 1001 - -
Amo18g0693 1001 CDD STKc_IRAK 660 930 - -
Amo18g0693 1001 Gene3D Phosphorylase Kinase; domain 1 615 731 - -
Amo18g0693 1001 Gene3D Ribonuclease Inhibitor 65 364 IPR032675 -
Amo18g0693 1001 ProSitePatterns Protein kinases ATP-binding region signature. 660 682 IPR017441 GO:0005524
Amo18g0693 1001 MobiDBLite consensus disorder prediction 974 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0693 Amo-Chr18 9533655 9537356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0693 100 934 Receptor kinase-like Gene Family AT5G07180 29.535 1.66e-77 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Amo18g0693 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0693 - - gmx:100785090 1486.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0693 18 9533655 9537356 Amo18g0693 18 9533655 9537356 ECH