Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0669 ATGGAGGATCCACCAACTGGTTTTCGGTTCTATCCTACAGAAGAAGAGCTAGTTGCTTTCTACCTAAACACCCAGCTTCAACTACAAGGCCACGCCAATAACATCAACAGGGTCATTCCAGTGGTTGACATCAATGGCGTTGAGCCCTGGACTCTTCCATCACTGGCGGGAGAGCTGTGCAGGGAAGAGAAGGAACAATGGTTCTTCTTTGTGCCTCGCCAAGAGAGGGAAGCCAGAGGGGGGAGGATCAACAGAACCACTGCTTCTGGTTACTGGAAAGCCACCGGATCACCGGGGTACGTATACTCTTCCGATAACCAAGTGATCGGAGTCAAGAAAACCATGGTTTTCTACAAAGGAAAAGCTCCCACCGGTCGCAAAACTAAATGGAAGATGCATGAATACCGCGCCATCGTTCAAGCCCCTAACCAATCTCCCACGGCTATTCCTCAGTTGAGGCACGAATTCAGCTTGTGTCGCGTGTACGTGATATCCGGAAGCTTCAGAGCATTTGATCGACGGCCACGGGAGGTGGTAGTGCCAAGAGTTCTTCATCATGGTTCTTCTACAACAAGTGCTCAGCAGCATCAAGGAGAATCATCAGCAAGGGTGCAGGCCAATAATAATAATAATGGGTCGAGCTCGTCGGAAACTTCCCTTTCATCAGGTGGTCCTGATTTGCCACCAGATACTGGAGGAGGAGGGTCATGTAGCAATTGGAATAGTAGTGAGGTTCAAGTTCAAGCTCAAGTTCAAGAACCACTATGGGAATGGGAACAACTCGATTGGCTATAA 795 0.4906 MEDPPTGFRFYPTEEELVAFYLNTQLQLQGHANNINRVIPVVDINGVEPWTLPSLAGELCREEKEQWFFFVPRQEREARGGRINRTTASGYWKATGSPGYVYSSDNQVIGVKKTMVFYKGKAPTGRKTKWKMHEYRAIVQAPNQSPTAIPQLRHEFSLCRVYVISGSFRAFDRRPREVVVPRVLHHGSSTTSAQQHQGESSARVQANNNNNGSSSSETSLSSGGPDLPPDTGGGGSCSNWNSSEVQVQAQVQEPLWEWEQLDWL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0669 264 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
Amo18g0669 264 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 263 - -
Amo18g0669 264 Pfam No apical meristem (NAM) protein 5 136 IPR003441 GO:0003677|GO:0006355
Amo18g0669 264 SUPERFAMILY NAC domain 4 162 IPR036093 GO:0003677|GO:0006355
Amo18g0669 264 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Amo18g0669 264 MobiDBLite consensus disorder prediction 185 245 - -
Amo18g0669 264 MobiDBLite consensus disorder prediction 185 225 - -
Amo18g0669 264 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0669 Amo-Chr18 9274478 9276141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0669 7 263 NAC Transcription Factor Family AT5G22380 54.651 1.38e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo18g0669 NAM 4.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0669 - - gmx:100780264 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0669 18 9274478 9276141 Amo18g0669 18 9274478 9276141 ECH