Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0656 ATGTATCATCATCAAGGGAAGAACATGCACTCTTCTTCAAGAATGCCAATCCCCTCTGAGAGGCACATGTTCCTTCAAACAGGAAACGGGTCTGGTGATTCTGGACTTGTTCTCTCAACTGATGCTAAGCCACGATTGAAATGGACGCCGGATCTTCATGCCAGGTTCATAGAAGCAGTGAACCAGTTAGGTGGAGCTGACAAGGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCAGGTCTTACTTTATATCATCTGAAGAGCCATCTGCAGAAGTACAGATTGAGCAAGAATTTGCATGGACAAACTAACACTGTAACACACAAAATCACAACAAATGCGGGGGCAACAACAAGTGAAAGATCACTTTCAGAACCCAGTGGAACTCATATGAACAAGTTAAGCCTTGTCCCACAGGCTAACAAAGATTTACATATAAGTGAGGCACTGCAGATGCAAATTGAAGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAAAGACACTTGCAGCTTCGGATAGAGGCACAAGGAAAATACCTGCAGTCTGTGCTAGAGAAAGCTCAAGAGACACTTGGTAGACAAAATTTGGGAATGGTAGGACTTGAAGCTGCTAAAGTTCAACTATCAGAGCTGGTGTCCAAGGTCTCCTCCCAGTGCTTGAACTCGGCATTTTCAGAGCTGAAGGAACTACAAGGATTTTGCCCCCAGCAACCACAAACCAACCAGCCAAATGATTGCTCAATAGATAGTTGCCTCACATCTTGTGAAGGGTCACAGAAGGAGCAAGAGATACAGAATGGTGGGATAGGTTTAAGGCACTTAAATGGCCATGGCCATGCATTCATGGAAAGAAAGGGAGGCACAGAAGCTCCTAAATGGAGTAATGAAGTGAAAAACAACACCTTTCTAGCTCCATTAGGCAAGAATTCAGAAAGAAGTAGCTATGGTGCAGAGAGAAGCAGTGGAAACTTGTCTATGAGCATTGGACTTGAAAGGGAAACTGAGAATGGAAGCAGCATGTACACTGAGAGTCACACTCACACAGATGGTGAGTTCTGGCACAGAAACAGCAATAGGACAGAACCAAAGAATGAAGCAATGGATGGAGGAAGAGGTTCCCATGATTATAGGTTGCCTCCTCCATACTTTTCAGCAGCAAGATTGGATTTAAACTCACATGGGGATAACAATGAAGCTGCAACAACAACAACAAGCTGTAAACAACTGGACTTGAACAGATTCAGTTGGAGCTGA 1263 0.4386 MYHHQGKNMHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQTNTVTHKITTNAGATTSERSLSEPSGTHMNKLSLVPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGMVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQQPQTNQPNDCSIDSCLTSCEGSQKEQEIQNGGIGLRHLNGHGHAFMERKGGTEAPKWSNEVKNNTFLAPLGKNSERSSYGAERSSGNLSMSIGLERETENGSSMYTESHTHTDGEFWHRNSNRTEPKNEAMDGGRGSHDYRLPPPYFSAARLDLNSHGDNNEAATTTTSCKQLDLNRFSWS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0656 420 Gene3D - 42 100 - -
Amo18g0656 420 MobiDBLite consensus disorder prediction 350 375 - -
Amo18g0656 420 Pfam MYB-CC type transfactor, LHEQLE motif 147 193 IPR025756 -
Amo18g0656 420 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Amo18g0656 420 MobiDBLite consensus disorder prediction 343 378 - -
Amo18g0656 420 Pfam Myb-like DNA-binding domain 45 96 IPR001005 -
Amo18g0656 420 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 420 IPR044848 GO:0003700
Amo18g0656 420 Coils Coil 149 169 - -
Amo18g0656 420 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Amo18g0656 420 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 100 IPR017930 -
Amo18g0656 420 PANTHER MYB-RELATED PROTEIN 2 2 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0656 Amo-Chr18 9135179 9137999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0656 75 420 G2-like Transcription Factor Family AT3G04030 50.565 5.54e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo18g0656 Myb_DNA-binding 3.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0656 - - gmx:100810396 625.935