Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0655 ATGGGGAGCCAGAGAATAATAGGAGGAGGACTTGGTTTATCTGAGGCAGGGCCTTCAACTCACCACCATCACCATGTCCCTTCTTATGGTGTTCTTCATGGAATTAATACTGCTAATCCATCAACCTTAATTAATGAAGGACATGCTTTTAACTTTGGAGAGTTGGAAGAGGCAATTGTGCTGCAAGGAGTAAAGGCAAGAAATGATGAAGGCAAAGCACCTTTATTCACAACAGCACCCAGACCTGCAGCTACACTAGAAATGTTCCCTTCATGGCCAATCAGATTTCACCAAACCTCAAGGGGAGGTTCAAAATCAGGAGGAGAAAGCACTGATTCAGCACTTTCAACAAAAACTGAGCCACCCTTCGAAGCAGAATCTCCAATGAGTAAAAAGGCAACAACACCTTCTTTAGATCATCAGCACCAGCTTCAACATGATCATCATGATGCCTCAAGAATAGTAGGCCCTTCTTCATCATCACAGAATCAATCACAAGCCAAATCACCTCATGAAAAGAGGAAGGGAGCTGGTTCCACATCAGAGAAACCACTTGATGCAAAGACATTGAGACGTTTGGCTCAAAACAGAGAGGCAGCAAGAAAAAGCCGTCTAAGGAAAAAGGCTTATGTGCAGCAATTAGAGTCAAGTAGATTAAAGCTTACACAACTTGAACAAGACCTTCAAAGGGCTCGTTCTCAGGGACTATTCATGGATTGTGGTGGTGTTGGAGGCAATCTAAGCTCCGGAGGTGCGATGTTTGACCTGGAATACGGAAGGTGGTTGGAGGAAGAGCAGCGGCTGATGGGGGAGCTCCGGAACGGGGTGCAGGCGGCGGTGTCGGAGGGGGAAATGAGAGGGATCGTGGATGGATATTTGTCCCATTACGATGAGCTGTTCAGGCTGAAGAGTGTGGCAGCGAAATCAGATGTTTTCCATCTCATCAATGGCATGTGGACCTCCCAAGCTGAACGCTGCTTCCTCTGGATCGGTGGTTTCAAGCCCTCGGACCTCATCACGATGTTGATACAACAGTTGGAGCCACTGGCGGAGCAACAGATAATGGGAATGTATGGCCTGCGCCATTCCTCACAGCAAGCGGAGGACGCTCTTTCTCAAGGCCTTGACCAGCTCCAGCAGTCTCTCGTCGACACCATCGCCGGCGGCCCCATTGTCGACGGCGTCCAACAGATGGTTGTTGCCATGGGCAAGCTTGCCAATCTTGAAGGCTTTGTTCGCCAGGCTGATAATTTGAGGCAGCAAACACTTCATCAATTATGTCGATTACTAACAGTTCGTCAAGCAGCACGGTGTTTTATTGTCATTGGAGAATATTATGGACGCCTTCGCGCCCTTAGTTCTCTTTGGGCATCAAGGCCACGAGAGACGTTGATGAGCGATGATAACTCATGCCAAACAACCACTGACTTGCAAATGGTGCATCCTTCTCATCATCAGAATCACTTCCCCAGCTTCTAA 1479 0.4801 MGSQRIIGGGLGLSEAGPSTHHHHHVPSYGVLHGINTANPSTLINEGHAFNFGELEEAIVLQGVKARNDEGKAPLFTTAPRPAATLEMFPSWPIRFHQTSRGGSKSGGESTDSALSTKTEPPFEAESPMSKKATTPSLDHQHQLQHDHHDASRIVGPSSSSQNQSQAKSPHEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGLFMDCGGVGGNLSSGGAMFDLEYGRWLEEEQRLMGELRNGVQAAVSEGEMRGIVDGYLSHYDELFRLKSVAAKSDVFHLINGMWTSQAERCFLWIGGFKPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEDALSQGLDQLQQSLVDTIAGGPIVDGVQQMVVAMGKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRETLMSDDNSCQTTTDLQMVHPSHHQNHFPSF* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0655 492 PANTHER TRANSCRIPTION FACTOR TGA9 73 469 - -
Amo18g0655 492 PANTHER TRANSCRIPTION FACTOR TGA9 73 469 - -
Amo18g0655 492 MobiDBLite consensus disorder prediction 88 190 - -
Amo18g0655 492 CDD bZIP_HBP1b-like 188 238 - -
Amo18g0655 492 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Amo18g0655 492 Gene3D - 187 236 - -
Amo18g0655 492 SUPERFAMILY Leucine zipper domain 188 231 IPR046347 GO:0003700|GO:0006355
Amo18g0655 492 SMART brlzneu 184 249 IPR004827 GO:0003700|GO:0006355
Amo18g0655 492 Pfam bZIP transcription factor 187 229 IPR004827 GO:0003700|GO:0006355
Amo18g0655 492 Pfam Seed dormancy control 269 343 IPR025422 GO:0006351|GO:0043565
Amo18g0655 492 MobiDBLite consensus disorder prediction 168 190 - -
Amo18g0655 492 ProSiteProfiles DOG1 domain profile. 251 459 IPR025422 GO:0006351|GO:0043565
Amo18g0655 492 MobiDBLite consensus disorder prediction 97 120 - -
Amo18g0655 492 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 230 IPR004827 GO:0003700|GO:0006355
Amo18g0655 492 Coils Coil 207 234 - -
Amo18g0655 492 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0655 Amo-Chr18 9115071 9122695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0655 142 492 bZIP Transcription Factor Family AT1G08320 67.416 9.64e-176 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo18g0655 DOG1 2.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0655 K14431 - gmx:100775461 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0655 18 9115071 9122695 Amo18g0655 18 9115071 9122695 ECH