Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0638 ATGGAGAGCACATTGGGTTTGTTGTTCTTCTTGTTCACACTCCTCTTCTGTATCTTCTCATTCCTGTTGTTCCTCTCGAGAATGAAGCCATGGTGCAACTGTCACACTTGCAGGACCTACACAACAATGAGTCGGACCACCCACTTCACAAACCTCTCCGATTGGTACACTCATCTCCTCCGTAACTCCGCCACCGGAACCATCCACGTCCACGTCTTGGGCAATATCGTAACTTCAAACCCCATCAACGTTGAGTACATGCTTAAGACGCGCTTCCAAAACTACCCCAAAGGGAYGCCGTTCTCCGCSATCCTGGGCGATCTCTTGGGCCACGGGATCTTCAATGTTGACGGCAGCGCGTGGATGTTCCAGAGGAAGATGGCCAGCCTGGAGCTCGGGAGCGTGGCGGTTCGGACCTACGCGCTGCAGATAGTGACGGAAGAGATACGAACCAGGCTCCTTCCTCTCATGGTTTCTTCGGTTGCATGTGGTCAACAGGACCAGGATAGTGGGATGGATTTACAAGACATATTGCGACGTTTCTCGTTCGACAACATTTGCAAATTCTCCTTCGGCGTGGACCCAGGTTGTCTCCAACCATCCCTACCTGTTTCACCCTTCGCCGCCGCTTTCGACACGGCCTCCAAGCTCTCGGCAGAGCGTGCAATGACATCATCACCAATCACATGGAAGATCAAGCGCCTACTTAACATTGGATCCGAGAAGAAGCTGAAGCAAGCCATCAAAATCARAAACAACTTAGCAGAAGAGTTAATAAACAAGCGCAGGAAAATCGGATTCTCCACAAGAAAGGATCTCCTCTCAAGGTTCATGAGCTCTGTCGAAAACGACAACAAATACCTCAGAGACATAGTCGTTAGTTTTCTATTGGCTGGTCGCGACACAGTTGCGGCCGCGTTAACCGGTTTCTTTTTCTTATTATCCAAAAACCCGAGTGTTGAGGTCTTGATCCGGGAAGAATTGGACCGGATCCTGGACAATCCGGTCCAGGAATGTGCGAGTTTTGAGCAGCTGCAGCAAATGCATTATCTCACTGCTGCGATTTACGAGAGCATGAGACTCTTTCCGCCGGTTCAGTTTGACTCCAAGTTCGCGCAAGAGGACGATGTGTTACCGGATGGTACATTTGTACCCATGGGTACGAGGGTTACATACCATCCGTATGCAATGGGTCGGATGGATCGGATTTGGGGGTCCGATTGCCTCAAATTCAAACCCGAAAGATGGTTGCATGCCGGTGTGTTTGTGCCGGAGGATCCATTTAAATACCCGGTTTTTCAGGCTGGGGTTAGGATTTGTTTGGGAAAAGAGTTGGCAGTTGTAGAGATGAAATCCTTGGTGGCTACATTGATAAGGCAATTTGATATTCGGGTAGTTGGGTCTGACACGGAGCCCCGGTTTGCACCAGGTCTTACCGCAACCATGCGGGGTGGGTTGTCGGTTCGGGTTTATGAGAGAAGTAGGTGA 1488 0.5007 MESTLGLLFFLFTLLFCIFSFLLFLSRMKPWCNCHTCRTYTTMSRTTHFTNLSDWYTHLLRNSATGTIHVHVLGNIVTSNPINVEYMLKTRFQNYPKGXPFSAILGDLLGHGIFNVDGSAWMFQRKMASLELGSVAVRTYALQIVTEEIRTRLLPLMVSSVACGQQDQDSGMDLQDILRRFSFDNICKFSFGVDPGCLQPSLPVSPFAAAFDTASKLSAERAMTSSPITWKIKRLLNIGSEKKLKQAIKIXNNLAEELINKRRKIGFSTRKDLLSRFMSSVENDNKYLRDIVVSFLLAGRDTVAAALTGFFFLLSKNPSVEVLIREELDRILDNPVQECASFEQLQQMHYLTAAIYESMRLFPPVQFDSKFAQEDDVLPDGTFVPMGTRVTYHPYAMGRMDRIWGSDCLKFKPERWLHAGVFVPEDPFKYPVFQAGVRICLGKELAVVEMKSLVATLIRQFDIRVVGSDTEPRFAPGLTATMRGGLSVRVYERSR* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0638 495 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0638 495 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0638 495 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0638 495 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0638 495 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0638 495 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0638 495 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0638 495 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0638 495 Pfam Cytochrome P450 77 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0638 495 Gene3D Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0638 495 Coils Coil 252 264 - -
Amo18g0638 495 PANTHER CYTOCHROME P450 10 490 - -
Amo18g0638 495 PANTHER SPHINGOLIPID TRANSPORTER SPINSTER-LIKE PROTEIN 3-RELATED 10 490 - -
Amo18g0638 495 Coils Coil 241 250 - -
Amo18g0638 495 SUPERFAMILY Cytochrome P450 54 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0638 Amo-Chr18 8826346 8828272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0638 22 494 Cytochrome P450 AT2G27690 60.915 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0638 K20624 - gmx:100813091 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0638 18 8826346 8828272 Amo18g0638 18 8826346 8828272 ECH
Amo18g0638 18 8826346 8828272 Amo13g0171 13 2130806 2132525 ECH