Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0635 ATGGACCCACCGCCACCACCAGCACCGCCGCCGTGGCAGGACGATCTCGCCGACGACCTCCAGTCACTCAGCTTCGCCTCCACGGCCACCACCACAACCACRGCCGACATCAAGCGCAGCACAAGCTTCGGCTCCGAAACCACCACACTCACGGCRTCCACCTCCGCCCGCATCCCTCTCCCTCCGACAAAGCCCCACGCCCCTTCCTCCGACCCCCGCTGGTCCGCAATCCACCGGATCCGATCCTCTGACGACGACTCCGCCTCCTCCGGCGGTCGCATCCTCCTCCCGTCCGACCTCGTCTTCTCCCGGCGCCTCGGCTCCGGCGACATCAGCTCCGTGTACCTGGCAGAGCTGAAGCCCTCCTCCGACGTAACGTTCGCGGCGAAGGTGATGGACAAGAAGGAGCTAGCTAGCAGGAGCAAGGAAGGGAGAGCGAGGACAGAGAGGGAAATTCTGGAGTTACTGGACCATCCTTTTTTGCCGACGCTGTACGGCGCCATCGAAGCACCTAAATGGCTGTGCCTCCTCACAGAGTTCTGCCCCGGCGGCGACCTCCACGTTCTCCGGCAGCGCCAGGCAAACAAACGCTTCAACGAAGGCGCCGTCAGGTTCTACGCCTCAGAGGTGTTGGTGGCACTTGAATACCTTCACATGTTGGGGATAGTCTACCGTGATCTCAAGCCAGAGAACGTGTTGGTTCYATCTGACGGCCACATCATGCTCACTGACTTTGACCTCTCCTTAAAATGTGATGACTCCACAGCAACGGCTCAGATCATCTCTGATCAAAAGAARTCTCCTCATATATTCCTACAAAAGGATCTCCACACTGAATCCTCCCAATTCACATCGTCCTCATGCATACTACCAAACTGTATAGTCCCCGCGGTGTCATGTTTTCACCCAAAGCGCAAGCGAAAGAAGAAGAAGCAAGGCCATCGTGGTGGGCCCGAGTTCGTRGCCGAGCCCATRGACGTCCGGTCCATGTCATTRGTTGGGACCCACGAGTACCTGGCCCCGGAGATTGTGTCCGGTGAGGGACACGGTAGTGCCGTCGACTGGTGGACCTTAGGGATATTTATATTTGAATTGTTTTATGGTGTGACACCCTTTAGAGGCATGGACAATGAGCTAACCCTAGCAAACATCGTGGCTCGAGCATTGGAGTTCCCAAAGGAACCCAGCGTGCCAGCCACGGCAAAGGACCTTATCTCACAGCTATTGGTTAAGGACCCCGGAAGGAGGCTTGGGTCAATAATGGGGGCTTCCCCTATCAAGAACCACCCATTTTTTCAAGGTGTGAATTGGGCATTGCTAAGYTGCACAACCCCACCCTTTGTACCCCCACCTTTTACTAAAGAAGCTGTATCCGATGAGAGTTGTCCCGAGACTCCCATTGATTATTATTAA 1413 0.557 MDPPPPPAPPPWQDDLADDLQSLSFASTATTTTTADIKRSTSFGSETTTLTASTSARIPLPPTKPHAPSSDPRWSAIHRIRSSDDDSASSGGRILLPSDLVFSRRLGSGDISSVYLAELKPSSDVTFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYGAIEAPKWLCLLTEFCPGGDLHVLRQRQANKRFNEGAVRFYASEVLVALEYLHMLGIVYRDLKPENVLVXSDGHIMLTDFDLSLKCDDSTATAQIISDQKKSPHIFLQKDLHTESSQFTSSSCILPNCIVPAVSCFHPKRKRKKKKQGHRGGPEFVAEPXDVRSMSLVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPSVPATAKDLISQLLVKDPGRRLGSIMGASPIKNHPFFQGVNWALLSCTTPPFVPPPFTKEAVSDESCPETPIDYY* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0635 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Amo18g0635 470 PANTHER FLIPPASE KINASE 1-RELATED 10 470 - -
Amo18g0635 470 MobiDBLite consensus disorder prediction 56 89 - -
Amo18g0635 470 PANTHER OS11G0150700 PROTEIN 10 470 - -
Amo18g0635 470 MobiDBLite consensus disorder prediction 1 27 - -
Amo18g0635 470 Gene3D Phosphorylase Kinase; domain 1 100 184 - -
Amo18g0635 470 Gene3D Transferase(Phosphotransferase) domain 1 185 290 - -
Amo18g0635 470 Pfam Protein kinase domain 329 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0635 470 Pfam Protein kinase domain 103 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0635 470 SMART serkin_6 100 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0635 470 Gene3D Transferase(Phosphotransferase) domain 1 327 450 - -
Amo18g0635 470 ProSiteProfiles Protein kinase domain profile. 100 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0635 470 SUPERFAMILY Protein kinase-like (PK-like) 93 458 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0635 Amo-Chr18 8804965 8809890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0635 11 470 AGC Kinase Gene Family AT3G44610 65.890 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Amo18g0635 Pkinase 4.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0635 K08286 - gmx:100792738 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0635 18 8804965 8809890 Amo18g0635 18 8804965 8809890 ECH