Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0615 ATGGACCCACCGCCACCACCAGCACCGCCGCCGTGGCAGGACGATCTCGCCGACGACCTCCAGTCACTCAGCTTCGCCTCCACGGCCACCACCACAACCACTGCCGACATCAAGCGCAGCACAAGCTTCGGCTCCGAAACCACCACACTCACGGCCTCCACCTCCGCCCGCATCCCTCTCCCTCCGACAAAGCCCCACGCCCCTTCCTCCGACCCCCGCTGGTCCGCAATCCACCGGATCCGATCCTCTGACGACGACTCCGCCTCCTCCGGCGGTCGCATCCTCCTCCCGTCCGACCTCGTCTTCTCCCGGCGCCTCGGCTCCGGCGACATCAGCTCCGTGTACCTGGCAGAGCTGAAGCCCTCCTCCGACGTAACGTTCGCGGCGAAGGTGATGGACAAGAAGGAGCTAGCTAGCAGGAGCAAGGAAGGGAGAGCGAGGACAGAGAGGGAAATTCTGGAGTTACTGGACCATCCTTTTTTGCCGACGCTGTACGGCGCCATCGAAGCACCTAAATGGCTGTGCCTCCTCACAGAGTTCTGCCCCGGCGGCGACCTCCACGTTCTCCGGCAGCGCCAGGCAAACAAACGCTTCAACGAAGGCGCCGTCAGGTTCTACGCCTCAGAGGTGTTGGTGGCACTTGAATACCTTCACATGTTGGGGATAGTCTACCGTGATCTCAAGCCAGAGAACGTGTTGGTTCGATCTGACGGCCACATCATGCTCACTGACTTTGACCTCTCCTTAAAATGTGATGACTCCACAGCAACGGCTCAGATCATCTCTGATCAAAAGAACTCTCCTCATATATTCCTACAAAAGGATCTCCACACTGAATCCTCCCAATTCACATCGTCCTCATGCATACTACCAAACTGTATAGTCCCCGCGGTGTCATGTTTTCACCCAAAGCGCAAGCGAAAGAAGAAGAAGCAAGGCCATCGTGGTGGGCCCGAGTTCGTTGCCGAGCCCATCGACGTCCGGTCCATGTCATTCGTTGGGACCCACGAGTACCTGGCCCCGGAGATTGTGTCCGGTGAGGGACACGGTAGTGCCGTCGACTGGTGGACCTTAGGGATATTTATATTTGAATTGTTTTATGGTGTGACACCCTTTAGAGGCATGGACAATGAGCTAACCCTAGCAAACATCGTGGCTCGAGCATTGGAGTTCCCAAAGGAACCCAGCGTGCCAGCCACGGCAAAGGACCTTATCTCACAGCTATTGGTTAAGGACCCCGGAAGGAGGCTTGGGTCAATAATGGGGGCTTCCCCTATCAAGAACCACCCATTTTTTCAAGGTGTGAATTGGGCATTGCTAAGGTGCACAACCCCACCCTTTGTACCCCCACCTTTTACTAAAGAAGCTGTATCCGATGAGAGTTGTCCCGAGACTCCCATTGATTATTATTAA 1413 0.5612 MDPPPPPAPPPWQDDLADDLQSLSFASTATTTTTADIKRSTSFGSETTTLTASTSARIPLPPTKPHAPSSDPRWSAIHRIRSSDDDSASSGGRILLPSDLVFSRRLGSGDISSVYLAELKPSSDVTFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYGAIEAPKWLCLLTEFCPGGDLHVLRQRQANKRFNEGAVRFYASEVLVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTATAQIISDQKNSPHIFLQKDLHTESSQFTSSSCILPNCIVPAVSCFHPKRKRKKKKQGHRGGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPSVPATAKDLISQLLVKDPGRRLGSIMGASPIKNHPFFQGVNWALLRCTTPPFVPPPFTKEAVSDESCPETPIDYY* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0615 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Amo18g0615 470 MobiDBLite consensus disorder prediction 40 73 - -
Amo18g0615 470 Gene3D Phosphorylase Kinase; domain 1 100 184 - -
Amo18g0615 470 MobiDBLite consensus disorder prediction 40 58 - -
Amo18g0615 470 ProSiteProfiles Protein kinase domain profile. 100 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0615 470 PANTHER FLIPPASE KINASE 1-RELATED 10 470 - -
Amo18g0615 470 Pfam Protein kinase domain 103 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0615 470 Pfam Protein kinase domain 329 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0615 470 Gene3D Transferase(Phosphotransferase) domain 1 185 291 - -
Amo18g0615 470 Gene3D Transferase(Phosphotransferase) domain 1 328 450 - -
Amo18g0615 470 SUPERFAMILY Protein kinase-like (PK-like) 93 458 IPR011009 -
Amo18g0615 470 SMART serkin_6 100 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0615 470 PANTHER OS11G0150700 PROTEIN 10 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0615 Amo-Chr18 8605171 8610110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0615 11 470 AGC Kinase Gene Family AT3G44610 66.525 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Amo18g0615 Pkinase 4.8e-36 CL0016