Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0612 ATGGAGAACACATTGGGTTTGTTGTTCTTCTTGTTCACACTCCTCTTCTGTATCTTCTCATTCCTGTTGTTCCTCTCGAGGATGAAGCCATGGTGCAACTGTCACACCTGCAGGACCTACACAACAATGAGTTGGACCACCCACTTCACAAACCTCTCCGATTGGTACACTCATCTCCTCCGTAACTCCGCCACCGGAACCATCCACATCCACGTCTTGGGCAATATCGTAACTTCAAACCCCATCAACGTTGAGTACATGCTTAAGACGCGCTTCCAAAACTACCCCAAAGGGAAGCCGTTCTCCGCCATCCTGGGCGATCTCTTGGGCCACGGGATCTTCAATGTTGACGGCAGCGCGTGGATGTTCCAGAGGAAGATGGCCAGCCTGGAGCTCGGGAGCGTGGCGGTTCGGACCTACGCGCTGCAGATAGTGACGGAAGAGATACGAACCAGGCTCCTTCCTCTCATGGTTTCTTCGGTTGCATGTGATCAACAGGACCAGGATAGTGTGATGGATTTACAAGACATATTGCGACGTTTCTCGTTCGACAACATTTGCAAATTCTCCTTCGGCGTGGACCCAGGTTGTCTCCAACCATCCCTACCTGTTTCACCCTTCGCCGCCGCTTTCGACACGGCCTCCAAGCTCTCGGCAGAGCGTGCAATGACATCATCACCAATCACATGGAAGATCAAGCGCCTACTTAACATTGGATCCGAGAAGAAGCTGAAGCAAGCCATCAAAATCATAAACAACTTAGCAGAAGAGTTAATAAACAAGCGCAGGAAAATCGGATTCTCCACAAGAAAGGATCTCCTCTCAAGGTTCATGAGCTCTGTCGAAAACGACAACAAATACCTCAGAGACATAATCGTTAGTTTTCTATTGGCTGGTCGCGACACTGTTGCGGCCGCGTTAACCGGTTTCTTTTTCTTGTTATCCAAAAACCCAAGTGTTGAGGTCTTGATCCGGGAACAATTGGACCGGATCCTGGACAATCCGGTCCAGGAATGTGCGAGTTTCGAGCAGCTGCAGCGAATGCATTATCTCACTGCTGCGATTTACGAGAGCATGAGACTCTTTCCGCCGGTTCAGTTTGACTCCAAGTTCGCGCAAGAGGATGATGTGTTACCGGATGGTACATTTGTACCCATGGGTACGAGGGTTACATATCATCCGTATGCAATGGGTCGGATGGAGCGGGTTTGGGGGTCCGATTGCCTCAAATTCAAACCCGAAAGATGGTTGCATGACGGTGTGTTTGTGCCGGAGGATCCATTTAAATACCCGGTTTTTCAGGCTGGGGTTAGGATTTGTTTGGGAAAAGAGTTGGCAGTTGTAGAGATGAAATCCTTGGTGGCTACATTGATAAGGCAATTTGATATTCGGGTAGTTGGGTCTGACACGGAGCCCCGGTTTGCACCAGGTCTTACCGCAACCATGCGGGGTGGGTTGTCGGTTCGGGTTTATGAGAGAAGTGGGCGATGGAATGACCCCTGA 1503 0.501 MENTLGLLFFLFTLLFCIFSFLLFLSRMKPWCNCHTCRTYTTMSWTTHFTNLSDWYTHLLRNSATGTIHIHVLGNIVTSNPINVEYMLKTRFQNYPKGKPFSAILGDLLGHGIFNVDGSAWMFQRKMASLELGSVAVRTYALQIVTEEIRTRLLPLMVSSVACDQQDQDSVMDLQDILRRFSFDNICKFSFGVDPGCLQPSLPVSPFAAAFDTASKLSAERAMTSSPITWKIKRLLNIGSEKKLKQAIKIINNLAEELINKRRKIGFSTRKDLLSRFMSSVENDNKYLRDIIVSFLLAGRDTVAAALTGFFFLLSKNPSVEVLIREQLDRILDNPVQECASFEQLQRMHYLTAAIYESMRLFPPVQFDSKFAQEDDVLPDGTFVPMGTRVTYHPYAMGRMERVWGSDCLKFKPERWLHDGVFVPEDPFKYPVFQAGVRICLGKELAVVEMKSLVATLIRQFDIRVVGSDTEPRFAPGLTATMRGGLSVRVYERSGRWNDP* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0612 500 Coils Coil 241 264 - -
Amo18g0612 500 Gene3D Cytochrome P450 31 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0612 500 PANTHER CYTOCHROME P450 10 492 - -
Amo18g0612 500 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0612 500 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0612 500 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0612 500 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0612 500 PANTHER SPHINGOLIPID TRANSPORTER SPINSTER-LIKE PROTEIN 3-RELATED 10 492 - -
Amo18g0612 500 Pfam Cytochrome P450 78 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0612 500 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0612 500 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0612 500 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0612 500 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g0612 500 SUPERFAMILY Cytochrome P450 52 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0612 Amo-Chr18 8579482 8581653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0612 22 494 Cytochrome P450 AT2G27690 60.879 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0612 K20624 - gmx:100813091 711.064