Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0595 ATGGCGGAAGAACACAGATGCCAAGCACCGCGCCTCTGCGCCAACAACTGCGGATTCTTCGGCAGCGCCGCCACGCAGAACCTCTGCTCCAAGTGTTACCGCGATCTCCAGCTCAAGGAGCAACAATCCTCCTCTGCCAAGCTCGTTCTCAACCAATCCCTGGTTCCTCCATCTCCGTCACCCGCCGCCGTTGCTCAGCCGTCTTCCTCTTCGTTTCCGCCAGCTGCAGCGATCGATTCGTCATCTTCGGCGGTAGATGCTGTGGATCAGCCACGCGCGGAGGCGGCGAAACCGGTTCTGCAGAACCGGTGCATGACGTGCAAGAGGCGCGTGGGACTCACGGGGTTCAAGTGCCGGTGCGGGCTGATGCTGTGCGGGACCCACCGGTATCCTGAGCAGCATGGTTGTGAGTTCGATTTCAAGGGATTAGGGAGGGATCAGATCGCGAAGGCGAATCCCGTCATCAAGGCTGAGAAGCTTGACAAGATCTGA 492 0.5955 MAEEHRCQAPRLCANNCGFFGSAATQNLCSKCYRDLQLKEQQSSSAKLVLNQSLVPPSPSPAAVAQPSSSSFPPAAAIDSSSSAVDAVDQPRAEAAKPVLQNRCMTCKRRVGLTGFKCRCGLMLCGTHRYPEQHGCEFDFKGLGRDQIAKANPVIKAEKLDKI* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0595 163 MobiDBLite consensus disorder prediction 56 77 - -
Amo18g0595 163 SUPERFAMILY AN1-like Zinc finger 90 158 IPR035896 -
Amo18g0595 163 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Amo18g0595 163 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Amo18g0595 163 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Amo18g0595 163 SMART AN1_Zf_4 104 141 IPR000058 GO:0008270
Amo18g0595 163 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 163 - -
Amo18g0595 163 Gene3D - 1 61 - -
Amo18g0595 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Amo18g0595 163 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 163 - -
Amo18g0595 163 Gene3D - 76 159 IPR035896 -
Amo18g0595 163 Pfam AN1-like Zinc finger 104 140 IPR000058 GO:0008270
Amo18g0595 163 ProSiteProfiles Zinc finger AN1-type profile. 98 144 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0595 Amo-Chr18 8156434 8158034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0595 1 163 C2H2 Transcription Factor Family AT3G52800 52.047 4.13e-47 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0595 - - gmx:100807363 229.95