Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0593 ATGCCTTGGAGTACTTCAAGACCTACCTCAAGTATGAGCCCAACCTTAAACATGAGGGAAGCCGTCCAGCACAAGTTCACCGAGTACTTGCGCCGGGCCGAGGAGATCCGGGCTGTTCTCGATGAAGGACAGCCCAGTCATACCTACTTTCGGCCTGTCGAAAAGCCTGGTGGTAGTGGGACTGGGCTGAACTCAGCGATCAAAAGGGAAAATCCCAATGTGAAGTGGAGTGACGTGGCAGGGTTGGAGAGAGCTAAGCAGGCCTTTCAGGAGGCTGTTATTTTGCCTTTGAAGTTCCCTCAGTTCTTTACTGGTAAACAACAACAACAGAGAACTTTTTTGCTGTATGGACCATCTGGTACAGGGAAATCATATTTGGCTAAAGCCGTTGCAACAGAAGCTAACTTCACATTTTTCAGTGCTTCTTCATCAAACCTTGTATCAAAGTGGAAGAGTGAAAGTGCAAAGTTGGTTTCAAGCCTTTTCCAAACGGCTAGAGAAAATGCTCCTTCTATCATTTTTATTGATGAGATAGATACCCTTTATGGAGAAGGCAATGATAATGAAGCTTCAACAAAAACTAAAACAGAACTTCTCGTACAGATGCAGGATATAGGATACAATGACCAGAAAATTCTGGTTATTGCAACAACAAATGCACCCTTTGCTTTGGACCAGCCAATAAGACGGCGGTTTGAAGCGTATATACATCCCGCTACCAGACTTGAAGGCTCGCCAACACATGTTCAAGGTGCATTTAGGAGATACTCCTTACAACTTGACTGA 786 0.4478 MPWSTSRPTSSMSPTLNMREAVQHKFTEYLRRAEEIRAVLDEGQPSHTYFRPVEKPGGSGTGLNSAIKRENPNVKWSDVAGLERAKQAFQEAVILPLKFPQFFTGKQQQQRTFLLYGPSGTGKSYLAKAVATEANFTFFSASSSNLVSKWKSESAKLVSSLFQTARENAPSIIFIDEIDTLYGEGNDNEASTKTKTELLVQMQDIGYNDQKILVIATTNAPFALDQPIRRRFEAYIHPATRLEGSPTHVQGAFRRYSLQLD* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0593 261 Pfam ATPase family associated with various cellular activities (AAA) 114 236 IPR003959 GO:0005524|GO:0016887
Amo18g0593 261 PANTHER AAA DOMAIN-CONTAINING 17 236 - -
Amo18g0593 261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 234 IPR027417 -
Amo18g0593 261 MobiDBLite consensus disorder prediction 47 67 - -
Amo18g0593 261 SMART AAA_5 109 243 IPR003593 -
Amo18g0593 261 SUPERFAMILY MIT domain 15 47 IPR036181 -
Amo18g0593 261 CDD AAA 80 239 - -
Amo18g0593 261 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 17 236 - -
Amo18g0593 261 Gene3D - 72 237 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0593 Amo-Chr18 8131890 8134561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0593 70 238 Calmodulin-binding Proteins AT3G56690 40.000 1.17e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0593 K12196 - cit:102616626 291.197