Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0557 ATGGCTTTGAGATGGCCGCTCCTACTGCGGTTCCGTTCTCAACAACCTCTTCTCGCTCCAACTAACTTTGCCGCCTTCTCCGATCTCGCCGAACCGCGTGCTTTTGACGTGCCGTGTCTTCCTTCCGTGAATCTACTGCACCGGAGCAATGTTTTGGCTCCGGCACTGAAGCTGAAGGTTCTGGCGCCGTACGTCGTCAAATGCCTCGCCAGATCCACAGAGGAGAAGCAATGGAGCGACGCCGAAACAGTCGTCTCTGATTCCGACGAAGCTGCTTCTGAGGATGACGGAAACGGTCAGCTTCGGAGCCGAACCTCTGCTTCGGAAACTGACCGTCTTGAGTCTCCGAGAGTTGCGACTCCCTCCTCCGGCGACTCTCTTTCGCTTGGAATTCGAGAACCGGTTTACGAAGTTGTGGAAGTGAGATCAGATGGAACAGTATCGACAAGAAAAATCAATAGGAGACAATTGTTGAAGTCAAGTGGTCTTCGTCCTCGGGACATTCGAAGTGTGGATCCGTCTTTGTTTTTGACGAATTCGGTACCCTCTTTGCTGGTTCGTGAGTATGCGATACTTCTAAATCTGGGCTCCCTTCGAGCAATAGCAATGAAAGATTGTGTACTTATATTTGACTATAATCGTAAAGGAGGGCAAGCTTTTCTGGAGTCATTGTTGCCCAGGTTGAACCCCAAGAACAGTAATGGAGGGCCATCAATGCCATTTGAACTCGAGGCTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGTTTAGAGCGCAGACTGATGGACTTAGAACCTCGAGTGCAGGCTCTTCTTGAAGCCTTGCCAAATCGATTAACGGGTGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAGGGCTGGCGCTCTTAGGCAGATGCTGCTCGACCTTTTGGAAGATCCCCATGAAATACGCCGTATATGTATTATGGGAAGAAACTGCACGGTTACAAAAGGAGACAATTTGGTCGAATGCTCTGTACCCTTAGAGAAGCAGATTGCCGAAGAGGAGGAGGAGGAAATTGAGATGCTTCTTGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCAGTCAGTTTGAGCTCACGAAGGCTTGAGGTTAGCCGAGTGGAACTGCTTCTCCAAGTAGGAACATTCTGTGTGGCAGTTGGTGCACTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCATATCTTGAAGAGCATGTGTTTGCATTTTGGCTGACGACAGCTGGAATAATTGTCGGTGCTGTTGTTGCTTTTTTCCTTATGTATTTCTACCTCAAGGCAAGGAAAATATTTTGA 1398 0.4728 MALRWPLLLRFRSQQPLLAPTNFAAFSDLAEPRAFDVPCLPSVNLLHRSNVLAPALKLKVLAPYVVKCLARSTEEKQWSDAETVVSDSDEAASEDDGNGQLRSRTSASETDRLESPRVATPSSGDSLSLGIREPVYEVVEVRSDGTVSTRKINRRQLLKSSGLRPRDIRSVDPSLFLTNSVPSLLVREYAILLNLGSLRAIAMKDCVLIFDYNRKGGQAFLESLLPRLNPKNSNGGPSMPFELEAVEAALLSRIQRLERRLMDLEPRVQALLEALPNRLTGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPHEIRRICIMGRNCTVTKGDNLVECSVPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVFAFWLTTAGIIVGAVVAFFLMYFYLKARKIF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0557 465 Coils Coil 254 274 - -
Amo18g0557 465 Gene3D Magnesium transport protein CorA, transmembrane region 392 463 - -
Amo18g0557 465 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 68 464 - -
Amo18g0557 465 MobiDBLite consensus disorder prediction 98 126 - -
Amo18g0557 465 Gene3D - 131 212 - -
Amo18g0557 465 Coils Coil 345 365 - -
Amo18g0557 465 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 401 456 IPR045863 -
Amo18g0557 465 Pfam CorA-like Mg2+ transporter protein 253 459 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo18g0557 465 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 68 464 IPR039204 -
Amo18g0557 465 Gene3D Magnesium transport protein CorA, transmembrane region 213 391 - -
Amo18g0557 465 MobiDBLite consensus disorder prediction 79 126 - -
Amo18g0557 465 CDD Mrs2_Mfm1p-like 138 464 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0557 Amo-Chr18 7483026 7488387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0557 129 465 MRS2 Gene Family AT5G22830 84.866 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0557 K16075 - gmx:100808371 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0557 18 7483026 7488387 Amo18g0557 18 7483026 7488387 ECH