Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0537 ATGGTTAATTACAATTTGAATTTGAATGTGTTTGTGCATGTGTTACAGGAATGCTTGTATGTACCAGCATGGCTTGAGAGTCTACTATCCATAACATTCTTCTCTTTGTGCAATGTTCATACCGAAAAGGCTAAGAATGATTGCAAAATGTTTTGCCTCGATTGCAATAACCATAAAGCATCTTGCGTTCATTGCATTGCATCTTCTCATGAAAAACATCGAGTGGTTCAGATAAGGAGATCATCGTATAATGATGTTGTGAGGGTGATAGAGATTGAAAATGCATTGAACATAAGTGGGATTCAGACATATAGGATCAATGGTTTCAGGGTCCTTTTCCTTATTACAAGGCCTCTCAATCCCAAAAAGAACAAGATTTCTGCCAAAGTTGGTTTTGGATGCAACACTAACTGTGTGATGTGCACAAGGATCATCGTTCAGCCTCATGTTTTTTGCTCTTTAGAGTGCAAGGTTTAA 477 0.3774 MVNYNLNLNVFVHVLQECLYVPAWLESLLSITFFSLCNVHTEKAKNDCKMFCLDCNNHKASCVHCIASSHEKHRVVQIRRSSYNDVVRVIEIENALNISGIQTYRINGFRVLFLITRPLNPKKNKISAKVGFGCNTNCVMCTRIIVQPHVFCSLECKV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0537 158 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 20 158 - -
Amo18g0537 158 Pfam PLATZ transcription factor 79 158 IPR006734 -
Amo18g0537 158 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 20 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0537 Amo-Chr18 7215437 7216068 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Amo18g0537 PLATZ 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0537 - - aip:107610412 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0537 18 7215437 7216068 Amo18g0537 18 7215437 7216068 ECH