Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0523 ATGGAGGTTGCTGCTATAATGGCAATTGCTCTTGCCAATGGAGGGGGTAAGCCTCCTGACTGGCAAGACTTTGTTGGTATTATCACTTTTCTTGTCATCAATTCAACCATCAGTTTCATAGAGGAGAACAATGCTGGTAATGCTGCTGCAGCTCTCATGGCTCGTCTCGCTCCGAAAGCAAAGGTGAAGTTGTCTGGATCAATTAGCAGTCAATACTTGACTGCATTGCTCATGGCAGCTCCTTTGACCCTTGGTGATGTTGAAATTGAGATTATCGATAAACTGATTTCTGTTCCCTACGTTGATATGTCTTTGAAACTGATGGAGCGCTTTGGAGTCCATGTGGAGCACAGTGGTAACTGGGATAGGTTCTTGGTCCACGGAGGTCAAAAGTCTCCTGGGAATGCTTTTGTTGAAGGCGATGCTTCTAGTGCCAGCTACTTCCTCGCAGGTGCAACTGTTACCGGTGGGACTATCACAGTTGTAGGCTGCGGCACAAGTAGTTTACAGGTATTATCCTTGTCCAAAACATGTATGGATGGCACAGTCTGGTTGACAAGCTTTGAAGATGTTCAAATATTATTCCCCACAGAAGTAGAAGGAAGAGGTGATAGGGTACTATGA 624 0.4535 MEVAAIMAIALANGGGKPPDWQDFVGIITFLVINSTISFIEENNAGNAAAALMARLAPKAKVKLSGSISSQYLTALLMAAPLTLGDVEIEIIDKLISVPYVDMSLKLMERFGVHVEHSGNWDRFLVHGGQKSPGNAFVEGDASSASYFLAGATVTGGTITVVGCGTSSLQVLSLSKTCMDGTVWLTSFEDVQILFPTEVEGRGDRVL* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0523 207 Gene3D Enolpyruvate transferase domain 116 182 IPR036968 GO:0016765
Amo18g0523 207 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 47 170 IPR001986 GO:0016765
Amo18g0523 207 PANTHER AROM/DEHYDROQUINATE SYNTHASE 58 170 - -
Amo18g0523 207 SUPERFAMILY EPT/RTPC-like 58 171 IPR013792 GO:0003824
Amo18g0523 207 PANTHER 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, CHLOROPLASTIC 58 170 - -
Amo18g0523 207 Gene3D - 1 92 - -
Amo18g0523 207 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 58 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0523 Amo-Chr18 6936635 6941578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0523 1 87 Primary Pumps ATPases AT2G07560 67.778 2.24e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0523 K00800 - adu:107459979 250.751