Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0521 ATGGCTAAGTTAAGTGCTAGAAGCATGAAGAAGAGTGCTACTAGTAACAGTTTTAGGTTTGTGGTAGAGAAACTAATTCATAAGAGTTTGTTAATGGGGAGCAACAACAAGAAGTCATCATCTTGTAATGATTGTGTGCCTGAGGATGTGAAAGAAGGACATTTTGCAGTGATTGCTGAGGGTGGTGGTGATGATGAAGAAGCTCCAAAGAGGTTGGTGATGCCACTGAGTTGTTTGAGAAACCCAGCATTCTTGAGGCTATTGGAGCAGGCTGAAGAGGAGTATGGCTTTGACCATGAAGGTGCACTCACCATTCCTTGCACCCCTTCTCAACTTCAAAGGATACTACTTCTTGAACAGCAACAAACTACCAACAACAACAACAACCACCTCTTCAACTTCTCAACTAATCACCTCCAATTCATCGTCTCATAA 435 0.423 MAKLSARSMKKSATSNSFRFVVEKLIHKSLLMGSNNKKSSSCNDCVPEDVKEGHFAVIAEGGGDDEEAPKRLVMPLSCLRNPAFLRLLEQAEEEYGFDHEGALTIPCTPSQLQRILLLEQQQTTNNNNNHLFNFSTNHLQFIVS* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0521 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 126 IPR003676 GO:0009733
Amo18g0521 144 Pfam Auxin responsive protein 34 116 IPR003676 GO:0009733
Amo18g0521 144 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 21 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0521 Amo-Chr18 6836239 6836712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0521 21 116 Calmodulin-binding Proteins AT3G43120 35.644 6.60e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0521 - K14488 aip:107612303 253.832