Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0510 ATGTGTAAGACCAAAATGGCCACCAACGCCGCCAACCCTACCTCAAGCCCACGACCCTCTCGAAATCCGGCCTCCCGCTCCAACTCCCAGCCCAGTACTCAAGCCCAAACGCCAAGGACATCGACACCAAAGCCCACCGCTCCATCCCGCTTTTCCCCAACCGCAACCGCAACCGCAACCACCACCTCCTACTCGGACCCTACAACATCATCTTCCTACGGCAGCTTCTCCACCACCGGCTACCGCCTCTCCTCCGACAACTCCATCTCCAGCCGCACCTCCCTCACCCACCTTCGCGATACTCTCCCCGAAAACCCAAACATCTATGACTTCTCCGAAATATGCGTCGCCACCAACAACTTCCTCGCCAAGCGCTACTCCTCCTCATCTTCCACTCCTTCCTGGCGCTGCACTCTACGCGGTGCTGACGTCATCGTCTTCCAGCGCAAGTTCCGCCGGAAGCTCGAGACCTCGCAGCTCCGGGAGCGGCTCTCCCTGATCTGCCGGAGCCATATCGTCAGCATCATCAAGCTCCTCGGCGCGTCCATCTCCGGCGACCACATCTACCTCGTCTACGAGTTCGTCCACGGCGCGAACCTCTCCGAATGCCTTCGGAACAAGATCAACACTCACTTCACGGTGCTGTCGACTTGGCTCTCGAGAATGCAGGTGGCCACCGATGTCGCTCACGGCCTCGATTACGTTCACAACAAGACAGGATTGAGCATCACTTTCGTCCACAACCACATCAAGAGCAGCGCTATAGTCATCACCGAGCCTAATTTCAATGCTAGGGTTTGCCATTTCGGTGCCGCGCAGCTCTGCGGTGAGATCCAGGAAGAGGAAAGCGATGTCGCTGCCGCGAAATTGGGAGAAATCGAGGAGGAACCCTTGGCATCTCCTTCCCCGGCGAGGTCCGAAAAATGGAAACGATCGGGTGGTTCTGGCATGCAATTCGAGGGGGTGAGGGGCTACATGTCGCCGGAATTTCAGGCCACCGGCGTGGCGACGCAGAAGTCCGACGTGTACGCGTTCGGTGTGGTCATGCTGGAGCTTCTCTCCGGGGAGGAGCCGCTGAGGTTCAGGTACGACAAGAAGAGTGGAGAGTTCGTGAGGACATCTGTGATCGACGCTGCGAGGGCGGCCGTGGACGGTGGTGAGGGGGCGCTGAGGAGGTGGGTGGATAAGAGGCTGAAAGACTCGTTCCCGGTTGAGGTTGCCGAGAAGGTGACACGTGTGGCGTTGGATTGCGTACACGTGGATCCAGATAAGAGGCCCAAGATGGGTCGCGTAGCTGACAAGATATCAAAGCTGTATTTGGAATCAAAGATTTGGTCTGAAAATGTTAGAATGCCCACTGAAATTTCTGTTTCTTTGGCTCCTCGATGA 1389 0.5724 MCKTKMATNAANPTSSPRPSRNPASRSNSQPSTQAQTPRTSTPKPTAPSRFSPTATATATTTSYSDPTTSSSYGSFSTTGYRLSSDNSISSRTSLTHLRDTLPENPNIYDFSEICVATNNFLAKRYSSSSSTPSWRCTLRGADVIVFQRKFRRKLETSQLRERLSLICRSHIVSIIKLLGASISGDHIYLVYEFVHGANLSECLRNKINTHFTVLSTWLSRMQVATDVAHGLDYVHNKTGLSITFVHNHIKSSAIVITEPNFNARVCHFGAAQLCGEIQEEESDVAAAKLGEIEEEPLASPSPARSEKWKRSGGSGMQFEGVRGYMSPEFQATGVATQKSDVYAFGVVMLELLSGEEPLRFRYDKKSGEFVRTSVIDAARAAVDGGEGALRRWVDKRLKDSFPVEVAEKVTRVALDCVHVDPDKRPKMGRVADKISKLYLESKIWSENVRMPTEISVSLAPR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0510 462 Pfam Protein kinase domain 153 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0510 462 SUPERFAMILY Protein kinase-like (PK-like) 136 439 IPR011009 -
Amo18g0510 462 Gene3D Phosphorylase Kinase; domain 1 83 194 - -
Amo18g0510 462 ProSiteProfiles Protein kinase domain profile. 120 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0510 462 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 462 - -
Amo18g0510 462 MobiDBLite consensus disorder prediction 1 76 - -
Amo18g0510 462 Gene3D Transferase(Phosphotransferase) domain 1 197 453 - -
Amo18g0510 462 PANTHER OS09G0572100 PROTEIN 1 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0510 Amo-Chr18 6695906 6697954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0510 104 445 Receptor kinase-like Gene Family AT1G51940 27.635 7.01e-33 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo18g0510 Pkinase 2.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0510 - - adu:107461746 837.795