Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0484 ATGCGATTGCTATGGGGGATAAAGTTGCCCCTACTCATATTCATTCAACTTTTATGTCTCAGCAAATTATATGCTGAGGCTTTGTTCACTTTGAAAGGTTCACTTAGCAGATCACAGCAATTGGGATGCAGCATTGTGAAGTATCCGTGTCGAATGCAATGGCCGTGTCGCCTTAACTGCTATAAACTAAAAGATCCAGGTGGAATAGCAGCAAAGGTGGATGGAAACAATGACATTCCAACACTTACACCTGTTCAAGAAGCTCAAGTTAACAGGCAGGGTGAAAGAAGGGCTGCTGCCGCCACAGTTGGTGGCGTTGCTGCCGCCTTATTGGTGATTATCATTGTGGTAATTGTGTATATCTGCTTGATGCGTCTTAAAAGAATGATGAGGCAAACATCTGAGAGTGCTTCTTCTATGCCATCTCCCACAGTTGAGATGGGAAGAAGCAACAACTCGCTGCAAGTAAACGAACTGTGTCCATATTATGCACACAATGCAAGGCAGTTAACAATTTTAGAACTAGAACAAGCTACAAGATGTTTCAATCAAAGTAATATTGTAGGTGAAGATAGATTTGGTTTGGTTTACCAGGGCTTGCTTCAAGATGGATCTATTGTGGCTATAAAGAGGAGAATATCTTCTCTAACGACGAATTTCATCCGCGAGGTGAGGAAGATATCATGCATTCACCATATGAATCTTGTGAAGCTTATAGGCTACTATGAAGATGGCTATCAACAATTACTAGTGTATGAACATCTCCCTAATGGCCATGTAGGGAATCACCTATATGATAGTGAAGGTTTACCTATTGGAAAGTTAGACTTGTGGAGGAGGTTATCCATTGCTTTAGGAGCATCCAAAGGACTGGAACATCTTCACAGTTTGGATCCTCCTTTGGTTCACACCAATTTCAGAACTAGAAATGTTTTTTTGGATGGAAGTTACACTGCCAAGGTTTCGGATTACGGATTCGGCACATTGCAAAGAGAAGTTGATCAGGCTGCAGCCTCATCTTCATGCATAGATTGCTTTCTTGACCCAGAGTTGAGTTCACCAGAAAACTATACACAGCAGAGTGATGTATACAGCTTTGGAGTCTTTTTACTGGAGTTGATTAGTGGTTGTGAAGTTTATAACAGAAACATGTCAACCTTAGAAGAAAACCTAGTATTCCAGGCAAAGGCAAAGGCAAAGGATAGTGATGGGTTGGAGAAGTTGATTGATGTAACATTAGGAGAGCATGAAAAACATGGTGCAAGGAGAATGGTGAGGTTGGCATTGTTATGCATAAGCAAGAGTTATAGAAGGCCATCAATGGGGCAAATAGTGGAAGAGCTAGAGCGGATTCAAAGAGAGATTGCTCCTTTGTATTCACAAGTCAATGAGGACATTGGTGTCGTCACTCTTGGGAGTGAACTTTTCCAATAA 1434 0.4142 MRLLWGIKLPLLIFIQLLCLSKLYAEALFTLKGSLSRSQQLGCSIVKYPCRMQWPCRLNCYKLKDPGGIAAKVDGNNDIPTLTPVQEAQVNRQGERRAAAATVGGVAAALLVIIIVVIVYICLMRLKRMMRQTSESASSMPSPTVEMGRSNNSLQVNELCPYYAHNARQLTILELEQATRCFNQSNIVGEDRFGLVYQGLLQDGSIVAIKRRISSLTTNFIREVRKISCIHHMNLVKLIGYYEDGYQQLLVYEHLPNGHVGNHLYDSEGLPIGKLDLWRRLSIALGASKGLEHLHSLDPPLVHTNFRTRNVFLDGSYTAKVSDYGFGTLQREVDQAAASSSCIDCFLDPELSSPENYTQQSDVYSFGVFLLELISGCEVYNRNMSTLEENLVFQAKAKAKDSDGLEKLIDVTLGEHEKHGARRMVRLALLCISKSYRRPSMGQIVEELERIQREIAPLYSQVNEDIGVVTLGSELFQ* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0484 477 Gene3D Transferase(Phosphotransferase) domain 1 255 469 - -
Amo18g0484 477 Pfam Protein tyrosine and serine/threonine kinase 185 447 IPR001245 GO:0004672|GO:0006468
Amo18g0484 477 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 68 475 - -
Amo18g0484 477 Gene3D Phosphorylase Kinase; domain 1 144 254 - -
Amo18g0484 477 SUPERFAMILY Protein kinase-like (PK-like) 162 458 IPR011009 -
Amo18g0484 477 ProSiteProfiles Protein kinase domain profile. 182 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0484 477 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 68 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0484 Amo-Chr18 6274845 6277213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0484 106 455 Receptor kinase-like Gene Family AT4G02010 34.530 1.15e-52 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Amo18g0484 PK_Tyr_Ser-Thr 2.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0484 - - gmx:100815066 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0484 18 6274845 6277213 Amo18g0484 18 6274845 6277213 ECH