Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0476 ATGGCTATGGCTGTGGCTCATCACAGAGAGAGTAGCAGCAGTGGTAGCATTGATAAGCACCTTGATTCTGGGAAATATGTGAGGTACACTGCTGAACAGGTTGAAGCTCTTGAAAGGGTCTATGCTGAGTGTAGGGAGAAGCAGAGAAAAGAAGCTTCACGGCTTCAAACTGTGAACCGGAAGCTTACAGCAATGAACAAGTTGTTAATGGAAGAAAATGATCGGTTGCAGAAACAAGTGTCACAGCTTGTGTGTGAGAATGGTTACATGAGGCAGCAATTGCAAACTACATCAGCTGCAACTACTGATGCTAGTTGTGATTCGGTGGTTACTACTCCTCAGCATTCCATGAGAGATGCTAACAACCCTGCTGGACTCCTATCAATTGCAGAGGAGACTTTGACAGAGTTCCTATCCAAGGCTACGGGGACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCACAAAGTTGCAGTGGAGTGGCAGCTCGAGCCTGCGGTCTTGTTAGTTTAGAACCTACAAAGATTGCGGAGATCCTGAAAGATCGTCCATCTTGGTTTCGGGAGTGTCGGAGCCTAGAGGTTTTCACAATGTTCCCTGCGGGTAATGGAGGGACCATTGAACTGACATATGCTCCAACGACACTGGCTCCTGCCCGGGATTTCTGGACTCTCAGATACACTACAAGCCTGGAAAATGGCAGTCTTGTGGTTTGTGAGAGATCTCTATCTGGTTCTGGGAGTGGCCCTAATGCAGCTGCTGCTGCTCAGTTTGTAAGGGCTGAAATGCTTCCTAGCGGCTATTTGATTCGACCATGTGAAGGTGGAGGATCAATCATTCCATCTGTGCCAGAAGTGTTGCGACCACTTTACGAATCATCAAAAGTGGTGGCCCAAAAAATGACAATTGCAGTAAGTTCTGTCTTTATGACATACAGATTGAATATCTCCGCACTTAGATATATAAGGCAAATAGCCCAGGAAACAAGTGGTGAAGTGGTATATGGATTGGGTCGGCAGCCTGCTGTTCTTCGAACATTCAGCCAAAGATTGAGCAGAGGCTTCAATGATGCTGTGAATGGATTCAATGATGACGGATGGACTGTACTAAACTGTGATGGTGCTGAGGATGTAATTATTGCAGTTAATTCAACCAAGAATTTGAGCGGCACTTCTAATCCTGCTAGTTCCCTTACATTTCTTGGAGGAATTCTCTGTGCAAAAGCTTCTATGTTGCTCCAAAACGTTCCTCCTGCTGTTTTGGTTCGCTTTCTCAGGGAGCACCGCTCAGAGTGGGCTGATTTCAATGTTGATGCTTATGCTGCTGCATCACTGAAAGCTGGCTCCTATGCTTATCCAGGAATGAGGCCTACAAGATTCACTGGCAGTCAAATAATCATGCCACTTGGCCATACAATTGAACATGAAGAGATGCTGGAAGTTATTCGGCTTGAAGGCCACTCTCTTGCCCAAGAAGATGCTTTTGCTTCTAGGGACATTCATCTCTTACAGATATGCAGCGGAATTGATGAGAATGCTGTGGGGGCTTGTTCTGAGCTTATATTTGCTCCAATCGATGAAATGTTCCCTGATGATGCTCCATTGGTACCATCTGGCTTCCGCATCATCCCATTGGATTCAAAACCAGGTGATAAAAAGGATGCAACAACTTCTAACAGGACCCTTGACTTGACATCTGGTCTTGAAGTTGGCCCGGCGACTACTCAGGGCGCAGGAGATGCATCATCAAGTCAAAACACCCGATCAGTGTTGACCATCGCGTTCCAGTTTCCTTTTGACAGCAATTTGCAAGATAATGTTGCTGTCATGGCACGACAATATGTCCGTAGTGTGATTTCTTCTGTCCAAAGGGTTGCTATGGCTATATCTCCTGGAATGAACCCTAACGTTGGGTCTAAACTATCTCCTGGTTCTCCAGAAGCCCTTACACTAGCTCACTGGATCTGCCAGAGTTATAGTTACTATTTAGGGTCTGACTTGCTGAGATCAGATTCTCTTGTTGGCGACTCGATGTTGAAGAGTTTGTGGCATCATCAGGATGCCATTTTGTGCTGCTCACTTGAATATAGTTTGTGTTTGTCGCTGCCGGTGTTCATCTTTGCGAATCAAGCTGGCCTTGACATGTTGGAAACAACCCTAGTGGCTTTACAAGACATCACATTGGACAAAATTTTTGACGAATCCGGTCGCAAGGCATTGTGTGCAGACTTTGCTAAGTTAATGCAGCAGGGTTATGCTTATCTTCCAGCTGGAATATGCATGTCAACAATGGGGAGGCATGTTTCATATGAACAAGCCATAGCATGGAAAGTGCTTGCTGCAGAAGACAACACTGTTCATTGCTTAGCTTTCTCTTTCATAAATTGGTCATTTGTATGA 2436 0.4569 MAMAVAHHRESSSSGSIDKHLDSGKYVRYTAEQVEALERVYAECREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMRQQLQTTSAATTDASCDSVVTTPQHSMRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRECRSLEVFTMFPAGNGGTIELTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGSGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIPSVPEVLRPLYESSKVVAQKMTIAVSSVFMTYRLNISALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWTVLNCDGAEDVIIAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYAAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFASRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKKDATTSNRTLDLTSGLEVGPATTQGAGDASSSQNTRSVLTIAFQFPFDSNLQDNVAVMARQYVRSVISSVQRVAMAISPGMNPNVGSKLSPGSPEALTLAHWICQSYSYYLGSDLLRSDSLVGDSMLKSLWHHQDAILCCSLEYSLCLSLPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCADFAKLMQQGYAYLPAGICMSTMGRHVSYEQAIAWKVLAAEDNTVHCLAFSFINWSFV* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0476 811 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 43 811 - -
Amo18g0476 811 MobiDBLite consensus disorder prediction 1 20 - -
Amo18g0476 811 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 44 IPR044830 GO:0003700
Amo18g0476 811 CDD bZIP 42 81 - -
Amo18g0476 811 SUPERFAMILY Bet v1-like 128 292 - -
Amo18g0476 811 Gene3D - 163 298 IPR023393 -
Amo18g0476 811 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 43 811 IPR044830 GO:0003700
Amo18g0476 811 Coils Coil 59 86 - -
Amo18g0476 811 MobiDBLite consensus disorder prediction 571 596 - -
Amo18g0476 811 SMART START_1 128 323 IPR002913 GO:0008289
Amo18g0476 811 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 44 - -
Amo18g0476 811 Pfam MEKHLA domain 662 810 IPR013978 -
Amo18g0476 811 Pfam START domain 129 292 IPR002913 GO:0008289
Amo18g0476 811 MobiDBLite consensus disorder prediction 558 596 - -
Amo18g0476 811 ProSiteProfiles START domain profile. 119 309 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0476 Amo-Chr18 6203475 6208823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0476 1 811 Homeobox Transcription Factor Family AT5G60690 76.471 0.0 1320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0476 K09338 - gmx:100804870 1421.76