Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0463 ATGATCAGTTTCTGTAATTGTTTTGGGATAATCAAGAAAGGAAAAAATGAAAGGGCTAAGCAAAGTGTAAAAAAAATTTTCTCACGGGGACTGTTGCGTGGAGAAACAGATGATTTCTCATATAGTGGTGAGTTTACTAGTAACACCACCAGTGGAGATGAAAGTGACAGCCAGCCTCGAGCCAACCGATCGGAGGAAATTTTGAACTTGAGAGCAGAGAAGGACATGGCTTGTAGGCGGGTACCTGTTAAGGAGACCAACAAACTTGTTCGTGAAGAGGATGAAGATGGGAACAAAATGATCAATGAGTATGTTCGGGAGTACAGGATTGGTTCAGGTAGTTATGGCAAAGTGGTTCTATATCGAAGTATTGTAGATGGAAAGCATTATGCAATTAAGTCCTTTCATAAGTCCCATTTGCTGAAGCTTCGAGTTGCAGGCTCTGAGACCGCCATGTCTGACGTTCTGCGTGAGGTACTTATTATGAAAATGGTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAATCAGATTGCTTCTACATGGTGCTAGAATATGTGGAGGGCAAATGGTTTTGTGAGGGTTCAGGTCGTGGTTGTGCCTTGGTGGAAGACACTGTTAGGAAATACTTGCGTGATATAGTATCGGGATTAAGATATCTTCATGATCATAATATAATACATTTGGACATCAAACCCGATAATTTGTTGATTACTCGTGAGGGTAAAGTCAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGTAATGTAA 792 0.4116 MISFCNCFGIIKKGKNERAKQSVKKIFSRGLLRGETDDFSYSGEFTSNTTSGDESDSQPRANRSEEILNLRAEKDMACRRVPVKETNKLVREEDEDGNKMINEYVREYRIGSGSYGKVVLYRSIVDGKHYAIKSFHKSHLLKLRVAGSETAMSDVLREVLIMKMVEHPNIVNLIEVIDDPESDCFYMVLEYVEGKWFCEGSGRGCALVEDTVRKYLRDIVSGLRYLHDHNIIHLDIKPDNLLITREGKVKIGDFSVSQAFEVM* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0463 263 ProSiteProfiles Protein kinase domain profile. 104 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0463 263 SUPERFAMILY Protein kinase-like (PK-like) 93 260 IPR011009 -
Amo18g0463 263 SMART serkin_6 104 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0463 263 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 2 261 - -
Amo18g0463 263 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 2 261 - -
Amo18g0463 263 MobiDBLite consensus disorder prediction 42 57 - -
Amo18g0463 263 MobiDBLite consensus disorder prediction 42 62 - -
Amo18g0463 263 Gene3D Transferase(Phosphotransferase) domain 1 203 262 - -
Amo18g0463 263 Pfam Protein kinase domain 104 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0463 263 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Amo18g0463 263 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Amo18g0463 263 Gene3D Phosphorylase Kinase; domain 1 98 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0463 Amo-Chr18 6063163 6065458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0463 110 257 CBL-interacting serine-threonine protein kinases AT2G25090 35.811 1.67e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Amo18g0463 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0463 K00908 - gmx:100776013 383.259