Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0455 ATGACGGTGGTAGACATCCTGTTCCGGGTGGACTCCATATGCAGCAAATACGACAAATACGACCTCGACAAGCAGCGGGAACTCAATGCCTACGGTGATGACGCCTTCGCTCGCCTCTACGCCACCGTTGATTCCACCATCGAAGCCGCCCTCAAGAAATCGGATGCTGCCTTGGCAGAGAACAACAGAGCAGCTGCTGCTGCTATGAATGCGGAGGTTCGACGCGCCAAGGGTAGACTCATGGACGAGATTCCCAAGCTCCGCAAATTGGCCAAGAAGAAGGTTAAAGGTTTGACAGACGAAGATTTGGCGATCCGTGAGGATCTTGTATTGGCATTGCCAGAAAGAATCCAAGCAATACCCGATGGTATTACCACTGTCAATCAAACTGGAGGAGGATGGACATCGCAGCCCAACATCAAGTTTGATTCAGACGTGCATCACGGCACTGATTATTTCGACCAAACTGAAGAATCCAGTCAGTTCAGAAATGAGTATGAAATGCGCAGGATCAAACAGGATGAGGGTCTTGACTTCATATCGGAGGGATTGGATACTTTGAAAAATCTAGCTCATGACATGAGTGAGGAAATGGATAGGCAAGTTCCTCTAATGGACGAAATTGACACAAAGGTCAATAGGGCAACAGCTGATGTGAGAAACACTAACAAAAGATTGAAGCAAAGTCTCACTGAGATGAGGTCTACTCAAAATTTCTTCATTGACATCATTCTGCTCTGTATTCTTATCAGCATTGTTCTCTATATATACAATCAACTGAGGTGA 786 0.4618 MTVVDILFRVDSICSKYDKYDLDKQRELNAYGDDAFARLYATVDSTIEAALKKSDAALAENNRAAAAAMNAEVRRAKGRLMDEIPKLRKLAKKKVKGLTDEDLAIREDLVLALPERIQAIPDGITTVNQTGGGWTSQPNIKFDSDVHHGTDYFDQTEESSQFRNEYEMRRIKQDEGLDFISEGLDTLKNLAHDMSEEMDRQVPLMDEIDTKVNRATADVRNTNKRLKQSLTEMRSTQNFFIDIILLCILISIVLYIYNQLR* 262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0455 261 Pfam SNARE domain 204 254 IPR000727 -
Amo18g0455 261 PANTHER SYNTAXIN-72 1 258 - -
Amo18g0455 261 CDD SNARE_Qc 172 228 - -
Amo18g0455 261 SUPERFAMILY SNARE fusion complex 161 227 - -
Amo18g0455 261 Coils Coil 205 225 - -
Amo18g0455 261 Gene3D - 167 228 - -
Amo18g0455 261 PANTHER SYNTAXIN 1 258 IPR045242 -
Amo18g0455 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 167 229 IPR000727 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo18g0455 Amo-Chr18 6002703 6004600 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0455 1 261 SNARE and Associated Proteins AT3G09740 63.158 1.76e-123 350
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0455 K08506 - gmx:100817729 350.132
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0455 18 6002703 6004600 Amo18g0455 18 6002703 6004600 ECH
Amo18g0455 18 6002703 6004600 Amo08g1092 08 18436648 18439746 hybridization