Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo18g0455 | ATGACGGTGGTAGACATCCTGTTCCGGGTGGACTCCATATGCAGCAAATACGACAAATACGACCTCGACAAGCAGCGGGAACTCAATGCCTACGGTGATGACGCCTTCGCTCGCCTCTACGCCACCGTTGATTCCACCATCGAAGCCGCCCTCAAGAAATCGGATGCTGCCTTGGCAGAGAACAACAGAGCAGCTGCTGCTGCTATGAATGCGGAGGTTCGACGCGCCAAGGGTAGACTCATGGACGAGATTCCCAAGCTCCGCAAATTGGCCAAGAAGAAGGTTAAAGGTTTGACAGACGAAGATTTGGCGATCCGTGAGGATCTTGTATTGGCATTGCCAGAAAGAATCCAAGCAATACCCGATGGTATTACCACTGTCAATCAAACTGGAGGAGGATGGACATCGCAGCCCAACATCAAGTTTGATTCAGACGTGCATCACGGCACTGATTATTTCGACCAAACTGAAGAATCCAGTCAGTTCAGAAATGAGTATGAAATGCGCAGGATCAAACAGGATGAGGGTCTTGACTTCATATCGGAGGGATTGGATACTTTGAAAAATCTAGCTCATGACATGAGTGAGGAAATGGATAGGCAAGTTCCTCTAATGGACGAAATTGACACAAAGGTCAATAGGGCAACAGCTGATGTGAGAAACACTAACAAAAGATTGAAGCAAAGTCTCACTGAGATGAGGTCTACTCAAAATTTCTTCATTGACATCATTCTGCTCTGTATTCTTATCAGCATTGTTCTCTATATATACAATCAACTGAGGTGA | 786 | 0.4618 | MTVVDILFRVDSICSKYDKYDLDKQRELNAYGDDAFARLYATVDSTIEAALKKSDAALAENNRAAAAAMNAEVRRAKGRLMDEIPKLRKLAKKKVKGLTDEDLAIREDLVLALPERIQAIPDGITTVNQTGGGWTSQPNIKFDSDVHHGTDYFDQTEESSQFRNEYEMRRIKQDEGLDFISEGLDTLKNLAHDMSEEMDRQVPLMDEIDTKVNRATADVRNTNKRLKQSLTEMRSTQNFFIDIILLCILISIVLYIYNQLR* | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo18g0455 | 261 | Pfam | SNARE domain | 204 | 254 | IPR000727 | - | |
Amo18g0455 | 261 | PANTHER | SYNTAXIN-72 | 1 | 258 | - | - | |
Amo18g0455 | 261 | CDD | SNARE_Qc | 172 | 228 | - | - | |
Amo18g0455 | 261 | SUPERFAMILY | SNARE fusion complex | 161 | 227 | - | - | |
Amo18g0455 | 261 | Coils | Coil | 205 | 225 | - | - | |
Amo18g0455 | 261 | Gene3D | - | 167 | 228 | - | - | |
Amo18g0455 | 261 | PANTHER | SYNTAXIN | 1 | 258 | IPR045242 | - | |
Amo18g0455 | 261 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 167 | 229 | IPR000727 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo18g0455 | Amo-Chr18 | 6002703 | 6004600 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo18g0455 | 1 | 261 | SNARE and Associated Proteins | AT3G09740 | 63.158 | 1.76e-123 | 350 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo18g0455 | K08506 | - | gmx:100817729 | 350.132 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo18g0455 | 18 | 6002703 | 6004600 | Amo18g0455 | 18 | 6002703 | 6004600 | ECH | |
Amo18g0455 | 18 | 6002703 | 6004600 | Amo08g1092 | 08 | 18436648 | 18439746 | hybridization |