Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0429 ATGGGGAATCATGGAGAGAACGGTAGTAACGGGGAGGTGGCCAGGAAGGAGAAGGAGGCGGACGCTTTGAAGTGGAAGGAGGCGGCAGAGGGATTGCAGGGGAGCCATTTTGAGGATGTGAGGAGGATGGTGGAGGACTACAGGAAGAGGGTGGTGAGGGTGGGAGGGGAGAGGCTGAGGATTGGTGAGGTGGCGGGGGTGGCGGTGGGGAGGGGGAGAGGGGTGGTGGAGGTGGAGGAGGGGGCGAGGGAGGGAGTGGAAGCAAGCAGTGAGTGGGTGATGGAGAGCATGCGGAGAGGGATAGACTGTTACGGCGTCACAACTGGGTTTGGTGCAACCTCACACCGGAGAACTACCCAAGCTGTTGCCCTTCAAACTGAGCTCATTAGGTTTTTGAATGCTGGAATATTTGGGAATGGCAAAGAATCATGTCATACTCTGCCACAAAGTGCAACAAGGGCTGCAATGCTTGTTCGAATCAACACACTCCTTCAAGGCTACTCTGGCATTAGATATGAGATTCTAGAAGCCATTGCAAAGCTCCTCAACAATAACATCACACCAGTAGTGCCATTGCGTGGCTCAATTTCCGCCTCCGGAGACTTGGTTCCGTTTTCATACATAGCAGGACTACTCACAGGGAGGCCTAATTCGAAGGCCTTCGGTCCAAATGGCGATACACTCACGGCCGAACAAGCCTTCAATCTAGCCGGCATTGGTAGCGAATTCTTCGAGTTGCAGCCTAAGGAGGGTCTTGCACTTGTCAATGGAACTGGTGTTGGTGCTGGTTTGGCTTCAATAGTCTTATTTGAGGCCAACATCTTAACCATTTTATCCGAAATCGTGTCTGCGATTTTCGCAGAAGTGATGCAGGGTAGGCCAGAGTTTACAGATCATTTGACTCACAAATTGAAGCATCACCCTGGTCAGATTGAAGCAGCAGCACTCATGGAACATATCTTGAATGGAAGTGCTTATGTTAAATCAGCACAGAAATTGCATGACACTGAGCCTTTTCAAAAGCCAAAGCAAGATAGATATGCTCTTAGGACTTCGCCGCAGTGGTTAGGACCACAAATTGAAGTGATTCGTTTGTCAACCAAGTCCATTGAAAGAGAGATCAACTCTGTGAATGACAATCCCTTGATCGATGTTTCAAGGAACAAGGCTTTGCATGGTGGCAATTTTCAAGGTACACCGGTTGGTGTTTCAATGGACAATACAAGGTTAGCACTGGCTGCAATTGGAAAACTCATCTTTGCACAAATGTCTGAGTTGGTCAATGAGTTCTATAACAATGGTTTACCTTCAAATCTCTCTGGGGGGCAATGTCCTAGCTTGGATTATGGATTCAAGGGTGCTGAGATAGCCATGGCTGCATATTGTTCTGAGCTTCAGTATCTGGCAAACCCAGTGACAAATCATGTGCAAAGCGCGGAACAACACAACCAGGATGTGAATTCATTGGGGCTGATCTCAGCTAGGAAAACAGCTGAAGCTGTTGAGATATTAAAGCTCATGTTTTCAACCTACTTGGTTGCTCTATGTCAGGCTATAGATTTGAGGCATTTGGAGGATAATATGAAGATCACAGTTAAGAACACAGTGAGCAGAGTAGCTAAGAAAGTCCTCAATCTAAGTGTCAATGGGGAGCTTCATCCTCATCCTTCAAAATCTTGTGAGAAAGATTTGCTCAAAGTGGTTGATTGCGAGCATGTCTTCACCTATATTGATGACCCCTGTAATCCTGCATACCCTTTGATGCAGAAACTGAGGCTAGTGCTTGTGGAACATGCGTTGATGAGGAGTAGCAATGGCTTGAAAAGCACGAGTGCGACCATCTTTGCAAAGATTGGCGCTTTTGAGGAGGAACTCAAGAAGGTGCTTCCCAAAGAAGTTGAGGCTACAAGGGATGCTTTTGAGGAAGGGAATGCAGCAAGTCCTAACAAAATTAAGCAGTGCAGATCCTATCCAATCTACAAGTTTGTGAGGGAGGAACTGGGAACAGAGTTTCTAACTGGAGAGAAGATTAAATCCCCTGGTGAAGATTTTGATAAAGTTTTCAATGCAATTAATCAGGGTAAGATAATAGACCCAATCTTTGAATGTCTCAAGGACTGGGATTGCACTCCTCTTCCCATATGTTGGAGCTCCTGA 2157 0.4678 MGNHGENGSNGEVARKEKEADALKWKEAAEGLQGSHFEDVRRMVEDYRKRVVRVGGERLRIGEVAGVAVGRGRGVVEVEEGAREGVEASSEWVMESMRRGIDCYGVTTGFGATSHRRTTQAVALQTELIRFLNAGIFGNGKESCHTLPQSATRAAMLVRINTLLQGYSGIRYEILEAIAKLLNNNITPVVPLRGSISASGDLVPFSYIAGLLTGRPNSKAFGPNGDTLTAEQAFNLAGIGSEFFELQPKEGLALVNGTGVGAGLASIVLFEANILTILSEIVSAIFAEVMQGRPEFTDHLTHKLKHHPGQIEAAALMEHILNGSAYVKSAQKLHDTEPFQKPKQDRYALRTSPQWLGPQIEVIRLSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLIFAQMSELVNEFYNNGLPSNLSGGQCPSLDYGFKGAEIAMAAYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMFSTYLVALCQAIDLRHLEDNMKITVKNTVSRVAKKVLNLSVNGELHPHPSKSCEKDLLKVVDCEHVFTYIDDPCNPAYPLMQKLRLVLVEHALMRSSNGLKSTSATIFAKIGAFEEELKKVLPKEVEATRDAFEEGNAASPNKIKQCRSYPIYKFVREELGTEFLTGEKIKSPGEDFDKVFNAINQGKIIDPIFECLKDWDCTPLPICWSS* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0429 718 Pfam Aromatic amino acid lyase 61 526 IPR001106 -
Amo18g0429 718 SUPERFAMILY L-aspartase-like 21 715 IPR008948 GO:0003824
Amo18g0429 718 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 19 715 - -
Amo18g0429 718 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 22 705 IPR005922 GO:0005737|GO:0006559|GO:0016841
Amo18g0429 718 Gene3D - 12 258 IPR024083 -
Amo18g0429 718 PANTHER HISTIDINE AMMONIA-LYASE 19 715 IPR001106 -
Amo18g0429 718 Gene3D - 525 649 IPR023144 -
Amo18g0429 718 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Amo18g0429 718 CDD PAL-HAL 59 522 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0429 Amo-Chr18 5653352 5656541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0429 21 715 Monolignol Biosynthesis Gene Families AT2G37040 74.532 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0429 K10775 - vvi:100241575 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0429 18 5653352 5656541 Amo18g0429 18 5653352 5656541 ECH