Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0419 ATGTGTAAGACCAAAATGGCCACCAACGCCGCCAACCCTACCTCAAGCCCACGACCCTCTCGAAATCCGGCCTCCCGCTCCAACTCCCAGCCCAGTACTCAAGCCCAAACGCCAAGGACATCGACACCAAAGCCCACCGCCCCATCCCGCTTTGCCCCAACCGCAACCGCAACCACCACCTCCTACTCGGACCCAACAACATCATCTTCCTACGGCAGCTTCTCCACTACCGGCTACCGCCTCTCCTCCGATAACTCCATCTCCAGCCGCACCTCCCTCACCCACCTTCGCGACACTCTCCCCGAAAACCCAAACATCTATGACTTCTCCGAAATCTGCGTCGCCACCAACAACTTCCTCGCCAAGCGCTACTCCTCCTCATCTTCCACTCCTTCCTGGCGCTGCACTCTACGCGGTGCTGACGTCATCGTCTTCCAGCGCAAGTTCCGCCGGAAGCTCGAGACCTCGCAGCTCCGGGAGCGGCTCTCCCTGATCTGCCGGAGCCATATCGTCAGCATCATCAAGCTCCTCGGCGCGTCCATCTCCGGCGACCACATCTACCTCGTCTACGAGTTCGTCKACGGCGCWAACCTCTCCGASTGCCTTCGGAACAAGATCAACACTCACTTCACGGTGCTGTCGACTTGGCTCTCGAGAATGCAGGTGGCCACCGATGTCGCTCACGGCCTCGATTACGTTCACAACAAGACAGGATTGAGCATCACTTTCGTCCACAACCACATCAAGAGCAGCGCTATAGTCATCACCGAGCCTAATTTCAATGCTAGGGTTTGCCATTTCGGTGCCGCGCAGCTCTGCGGTGAGATCCAGGAAGAGGAAAGCGATGTCGCTGCCGCGAAATTGGGAGAAATCGAGGAGGAACCCTTGGCATCTCCTTCCCCGGCGAGGTCCGAAAAATMGAAACGATCGGGTGGTTCTGWCATGCAATTCGAGGGGGTGAGGGGKTACATGTCGCCGGAATTTCAGGCCACCGGCGTGGCGACGCAGAAGTCCGACGTGTACGCGTTCGGSGTYGTRATGCTGGAGCTTCTCTCCGGGGAGGAGCCGCTGAGGTTCAGGTACGACAAGAAGAGTGGAGAGTTCGTGAGGACATCTGTGATCGACGCTGCGAGGGCGGCCGTGGACGGTGGTGAGGGGGCGCTGAGGAGGTGGGTGGATAAGAGGCTGAAAGACTCGTTCCCGGTTGAGGTTGCCGAGAAGGTGACACGTGTGGCGTTGGATTGCGTACACGTGGATCCAGATAAGAGGCCCAAGATGGGTCGCGTAGCTGACAAGATATCAAAGCTGTATTTGGAATCAAAGATTTGGTCTGAAAATGTTAGAATGCCCACTGAAATTTCTGTTTCTTTGGCTCCTCGATGA 1383 0.5683 MCKTKMATNAANPTSSPRPSRNPASRSNSQPSTQAQTPRTSTPKPTAPSRFAPTATATTTSYSDPTTSSSYGSFSTTGYRLSSDNSISSRTSLTHLRDTLPENPNIYDFSEICVATNNFLAKRYSSSSSTPSWRCTLRGADVIVFQRKFRRKLETSQLRERLSLICRSHIVSIIKLLGASISGDHIYLVYEFVXGANLSXCLRNKINTHFTVLSTWLSRMQVATDVAHGLDYVHNKTGLSITFVHNHIKSSAIVITEPNFNARVCHFGAAQLCGEIQEEESDVAAAKLGEIEEEPLASPSPARSEKXKRSGGSXMQFEGVRGYMSPEFQATGVATQKSDVYAFGVVMLELLSGEEPLRFRYDKKSGEFVRTSVIDAARAAVDGGEGALRRWVDKRLKDSFPVEVAEKVTRVALDCVHVDPDKRPKMGRVADKISKLYLESKIWSENVRMPTEISVSLAPR* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0419 460 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 460 - -
Amo18g0419 460 ProSiteProfiles Protein kinase domain profile. 118 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0419 460 PANTHER OS09G0572100 PROTEIN 1 460 - -
Amo18g0419 460 MobiDBLite consensus disorder prediction 287 317 - -
Amo18g0419 460 MobiDBLite consensus disorder prediction 1 75 - -
Amo18g0419 460 Gene3D Phosphorylase Kinase; domain 1 81 192 - -
Amo18g0419 460 Pfam Protein kinase domain 151 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0419 460 Gene3D Transferase(Phosphotransferase) domain 1 196 451 - -
Amo18g0419 460 SUPERFAMILY Protein kinase-like (PK-like) 134 437 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0419 Amo-Chr18 5518049 5520346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0419 102 443 Receptor kinase-like Gene Family AT1G51940 28.205 3.20e-33 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo18g0419 Pkinase 2.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0419 - - adu:107461746 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0419 18 5518049 5520346 Amo18g0419 18 5518049 5520346 ECH