Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0396 ATGCAATCTACAACTGCAATGCAGAGATCAGGCTTCGGCTCCGATGGAGTATACAGGTCACTCAGGCCTTCACTCCATCTTCCAAACAACCCAAACCTCTCTCTCGCCACCCACCTCTTCTCCAACGTCTCTTCCTTCGCCACTAAACCCGCTCTCTTCGACGCCGACACCTCCCAATCCCTCACCTTCGAGGAGATGAACTCCCTCGCCGTTAGAGCCTCCCACGCCCTCCAACGCCTCGGGATATCCAAAAACGACGTCGTTCTCTTCCTCTCCCCAAACACCATCTACTACCCCGTCTGCTTCCTCGCGGTCACCGCCCTCGGCGCCATCGCCTCCACCGTCAATCCCTCCTACACCGCCTCCGAAGTCTCCAAACAACTCAAAGACTGCAACCCCAAACTCATCTTAACCGTGCCGGACCAATGGGATAAAGTGAAGACCTTCAATCTCCCCGCAGTTTTCCTCGATTCGGATCCCACCGTCCACGTGTCACCATCGCAACGGGCCCCCAAGATCATGAGCTTCCACGATTTCGTGAAACTCGCCGGCACTGAAACAGAGTTCCCGAAGAGCAGCGTGAAGCAGAGCGACACGGCGGCGCTGCTGTACTCCTCGGGAACAACGGGGTTGAGCAAGGGCGTGGTTCTGACACACCAGAACTTCATCGCGGCGGCGAAGATGGCATGCATGGACGACGAGATGGCGGGGCAGATGCACGACGTGTTCCTATGCGTGCTTCCAATGTTCCACGTGTTCGGGCTGGCGTTGATACTGTACTCGCAGCTGCAGCGTGGGAACGCGGTGGTGTGCTTGAAGAGGTTCGAGTTGAATGCGTTGTTGAGAAGCATCGAAAAGTACAAGGTCACTCACTTGTGGGTAGTGCCTCCCATCGTTCTTGCTCTTGCCAAACACGCCCTTGTTGACAAGTTTGACCTCTCGTCGTTGCGCCACATCGGTTCCGGCGCTGCCCCTCTCGGCAAAGAACTCATGCACGACTGTTCCAAGCGTTTCCCTCGCGCTATCGTCATGCAGGGGTATGGTATGACGGAGACTTGTGGGATTGTTTCCATGGAGAATTCGAGGGGAGGGGTCAGGAACAGTGGGTCAACGGGAATGCTAGCTCCGGGAGTGGAAGCTCAAATAGTTAGCGTGGACTCGCTGAAGCCACAACCACCTTCAAAGATTGGCGAGATTTGGGTTCGTGGTCCTAACATGATGCAAGGTTATCATAACAATCCACGGGCCACAGAATTGACCGTAGATAAACAAGGGTGGATACATACAGGAGATCTTGGATATTTTGATGAAGAGGGGCATCTTTTTGTTGTTGATCGCATCAAAGAACTGATCAAGTATAAAGGTTTTCAGGTTGCGCCAGCAGAGCTAGAAGGCCTTCTTGTTTCTCACCCTCAAATACTTGATGCTGTTGTCATCCCTTATCCTGATGCTGAGGCTGGTGAGGTTCCTGTTGCCTATGTTGTTCGTTCATCCAACAGTTCACTCACTGAAGAAGACATCATCAACTTTGTTGCTGGTCAGGTTGCACCTTTCAAACGATTGAAAAGGGTTACATTCATCAATTCTGTTCCTAAGACAGCATCAGGAAAAATTCTCAGAAGAGAGCTTATAGATAAAGCAAGATCCAAAATATAA 1656 0.5205 MQSTTAMQRSGFGSDGVYRSLRPSLHLPNNPNLSLATHLFSNVSSFATKPALFDADTSQSLTFEEMNSLAVRASHALQRLGISKNDVVLFLSPNTIYYPVCFLAVTALGAIASTVNPSYTASEVSKQLKDCNPKLILTVPDQWDKVKTFNLPAVFLDSDPTVHVSPSQRAPKIMSFHDFVKLAGTETEFPKSSVKQSDTAALLYSSGTTGLSKGVVLTHQNFIAAAKMACMDDEMAGQMHDVFLCVLPMFHVFGLALILYSQLQRGNAVVCLKRFELNALLRSIEKYKVTHLWVVPPIVLALAKHALVDKFDLSSLRHIGSGAAPLGKELMHDCSKRFPRAIVMQGYGMTETCGIVSMENSRGGVRNSGSTGMLAPGVEAQIVSVDSLKPQPPSKIGEIWVRGPNMMQGYHNNPRATELTVDKQGWIHTGDLGYFDEEGHLFVVDRIKELIKYKGFQVAPAELEGLLVSHPQILDAVVIPYPDAEAGEVPVAYVVRSSNSSLTEEDIINFVAGQVAPFKRLKRVTFINSVPKTASGKILRRELIDKARSKI* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0396 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 550 - -
Amo18g0396 551 Pfam AMP-binding enzyme C-terminal domain 462 537 IPR025110 -
Amo18g0396 551 Gene3D - 449 550 IPR045851 -
Amo18g0396 551 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 10 550 - -
Amo18g0396 551 CDD 4CL 27 543 - -
Amo18g0396 551 ProSitePatterns EF-hand calcium-binding domain. 54 66 IPR018247 -
Amo18g0396 551 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Amo18g0396 551 Gene3D - 15 448 IPR042099 -
Amo18g0396 551 Pfam AMP-binding enzyme 42 453 IPR000873 -
Amo18g0396 551 SUPERFAMILY Acetyl-CoA synthetase-like 26 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0396 Amo-Chr18 5243331 5246815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0396 7 551 Monolignol Biosynthesis Gene Families AT4G05160 64.587 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0396 K01904 - gmx:100797843 790.03