Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0391 ATGTCGCGCCATAAACGAAAGGATATAATAAAAGCTTTAAAGAAAGATAACACTGATGCTATACTATACATTGATCTTCTTTTTTTTGTGCGTGACTTCAAGGATCGCAGAGCTGCTATGATCAAAGCCCTCACCACTGATGTTGAGGAGTTTTACCGGCAGTGTGATCCGGATAAGGAGAACCTCTGTCTGTATGGATACCCCATTAAACAGTGGGAAGTTAATTTACCCGTTGAAGAAGTTCGAGCAATAACAAATCATATAACTTAA 270 0.3889 MSRHKRKDIIKALKKDNTDAILYIDLLFFVRDFKDRRAAMIKALTTDVEEFYRQCDPDKENLCLYGYPIKQWEVNLPVEEVRAITNHIT* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0391 89 Pfam Alfin 31 82 IPR021998 GO:0006355|GO:0042393
Amo18g0391 89 PANTHER CPG BINDING PROTEIN 30 82 IPR045104 GO:0006355|GO:0042393
Amo18g0391 89 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3 30 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0391 Amo-Chr18 5163457 5163757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0391 31 78 Alfin-like Transcription Factor Family AT5G26210 77.083 4.09e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0391 - - vvi:100247536 98.9821