Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0390 ATGGGGTTACAGCTGATACTATTCCTGTTAATCAAGCTACATTTAGTTCTCTGTATTCCACAGCTTCATCAATATGCAGCAACAAATCTGCACCATTCAAGGGTCAGAAGCCATTCAAGTATTGCATTGCCACCATCTGAGTCATCATATTCTAGAGTTCCTGCATCTATAGCACTTCCTCCTTCCAAGGCATCTTATGGAGTTCATGGAACTACTGCAGTTTCACCATCCAAGTCATTCTCCAAAGCTCCTACAAAGATGTGGATTCATGGTTATGTGGATTCTCCAATATCATCACATCATAAGCACCACAATTACAAAAGAAAGTTTAGAAACCAAACTCCTGAGCCAACCTACCCAAACAATCCTCATACTCATCAAGGTACTTCAGTCTTCAAATCACAGCCTCATTTCTTTTCACCAAAAAGCTGGAATTCTGCTGCACCTGCACCATCACCATCACCATCAGTTTTATCAGAACACTTGAATGTGCCCTCTCCCTCCCCAAGAATTTCACCTCTAGGTTCATCATTGAATAAGATAAAGACTCCACCACCAGCATATGCTTTGGTTCTTCCACCTCCACCACCTAATAAGGATTGCATGATGGTGACTTGCTCAGAGCCATTGACAAATACACCTCCTGGATCTCCTTGTGGTTGTGTGTGGCCACTTCAAGTTAAACTCCACATCAGCATTGCAATATACAAGTTCTTCCCTTTGGTTTTCAAGCTAGCTGAGGAAATTGCAGCCAGTCTTTTGTTGAGTCGCAACCAGGTTCRCATTGTTGGAGCTAATGCAGCAAATCATCAACTAGAGAAAACCACTGTTCTCTTAAATTTGGTACCTCAAGGAGTTAAGTTTGATGATACAACAGCATTCTTGATATACAAGAAATTCTGGCACAAAGAAATTCTCACTGATGCTTCCCTTTTTGGTGCCTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCTTCTCCACCTTCAAGTCCTTTTGATGTTTCTGGTATAGTTGACCCAGATGCTGTTGGTAATGATGGGAATTTAATAAAGCCTTTAGGAGTTGATGTCTCTAATAAGAAGAAAAAAGAAGGGAATGGCGAAAGAACGGTTGGTATGCTCGTGTTGTCSTGTTTTGCAGCTTCTGTTCTGTTCMTTGGAGTTACTTGGCTTTGTCTATTGAAATGCCACTGTCCAGCCCTTGAAACTGAACAAGCTACAGATGTTATAATTGCACCCTCTTTCAAAAATTCAGGCATTGCCAGGTCATTGCCTTATGAGAACATGGTGAATTCTAGATCAACCTCAACCAATTCTGGAACAATAGCATATGCAGGATCAGCTAAGATATTCASTTTGAATGAAATAGAGAAAGCAACAAATAGCTTCAGTTCTTCAAGAATATTAGGAGAAGGTGGCTTTGGCCTTGTTTACAAAGGAGGCCTACAAGATGGGAGGGATGTTGCAGTGAARATTCTCAAAAGGGATGATCATCATGGCGGCCGCGAATTTTTGGCCGAAGTTGAGATGCTTAGCCGTCTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATTGAGAAACAGAGTCGTTGCCTTGTCTATGAGCTTGTTCCTAATGGAAGTGTAGAATCCCACTTACATGGTTCAGACAAGGAAACAGGTCCACTTGATTGGGATGCACGGATGAAGATTGCGCTTGGCGCTGCTCGAGGATTGGCTTATCTGCATGAAGATTCAAATCCATGTGTCATACATAGAGACTTCAAGTCYAGCAAYATCTTGTTGGAACATGACTTCACACCCAAGGTATCAGATTTTGGATTGGCTAGAACAGCACTTGATGAGAGAAACAAGCACATTTCCACACATGTTATGGGCACATTTGGGTATCTAGCTCCTGAATATGCAATGACAGGACATCTTCTTGTGAAAAGTGATGTTTACAGTTATGGAGTAGTCCTCCTAGAGCTCCTAACCGGGAGAAAGCCTGTGGACTGGTCGCGATCGCCTGGTCAAGAATACCTTGTTGCTTGGGTTCGTCCGCTTCTCACAAGTAAAGAAGGTTTGGAGATGATTATAGACCCGGATATAAAGCACAGCATTTCTCTTGACAGCATACTAAAAGTTGCAGCCATTGCATCCATGTGTGTGCAAGAAGAAGTCACTCAACGCCCTTTCATGGGTGAAGTTGTGCAGGCCTTGAAGTTGGTATGCAGTGAGTTTGAGGAGACAGACTATGCAATACAGGCAAGTTTTCAAGATGATGTACAAGGGAAGTTTTCCAAAAGTTCAGATGAGAGAGTGGATTTTTCAGTGTAA 2331 0.4187 MGLQLILFLLIKLHLVLCIPQLHQYAATNLHHSRVRSHSSIALPPSESSYSRVPASIALPPSKASYGVHGTTAVSPSKSFSKAPTKMWIHGYVDSPISSHHKHHNYKRKFRNQTPEPTYPNNPHTHQGTSVFKSQPHFFSPKSWNSAAPAPSPSPSVLSEHLNVPSPSPRISPLGSSLNKIKTPPPAYALVLPPPPPNKDCMMVTCSEPLTNTPPGSPCGCVWPLQVKLHISIAIYKFFPLVFKLAEEIAASLLLSRNQVXIVGANAANHQLEKTTVLLNLVPQGVKFDDTTAFLIYKKFWHKEILTDASLFGAYEVLYVHYPGLPPSPPSSPFDVSGIVDPDAVGNDGNLIKPLGVDVSNKKKKEGNGERTVGMLVLSCFAASVLFXGVTWLCLLKCHCPALETEQATDVIIAPSFKNSGIARSLPYENMVNSRSTSTNSGTIAYAGSAKIFXLNEIEKATNSFSSSRILGEGGFGLVYKGGLQDGRDVAVKILKRDDHHGGREFLAEVEMLSRLHHRNLVKLIGICIEKQSRCLVYELVPNGSVESHLHGSDKETGPLDWDARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDWSRSPGQEYLVAWVRPLLTSKEGLEMIIDPDIKHSISLDSILKVAAIASMCVQEEVTQRPFMGEVVQALKLVCSEFEETDYAIQASFQDDVQGKFSKSSDERVDFSV* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0390 776 Gene3D Phosphorylase Kinase; domain 1 436 540 - -
Amo18g0390 776 PANTHER OS01G0750732 PROTEIN 7 763 - -
Amo18g0390 776 ProSiteProfiles Protein kinase domain profile. 465 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0390 776 MobiDBLite consensus disorder prediction 112 177 - -
Amo18g0390 776 CDD STKc_IRAK 471 739 - -
Amo18g0390 776 Pfam Protein tyrosine and serine/threonine kinase 468 738 IPR001245 GO:0004672|GO:0006468
Amo18g0390 776 SUPERFAMILY Protein kinase-like (PK-like) 440 738 IPR011009 -
Amo18g0390 776 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Amo18g0390 776 Gene3D Transferase(Phosphotransferase) domain 1 541 762 - -
Amo18g0390 776 MobiDBLite consensus disorder prediction 107 177 - -
Amo18g0390 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Amo18g0390 776 PANTHER OS01G0750732 PROTEIN 7 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0390 Amo-Chr18 5123422 5126941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0390 198 765 Receptor kinase-like Gene Family AT5G56890 61.340 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Amo18g0390 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0390 - - gmx:100814040 1068.14