Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0374 TCAGCAATCTTTTTGACGTCCAAAGCAAATAACGTAAAAGCTTCAAACATTTTGTTGACTACTTGCACAAAATTATCTGATTTTGGTTTGTCAAAAAGTATCCCAACGGATGGGAGGAGTCATGTTTCAACTGTTGTTGCCGGCACTGCTGACTACTTGGACCCCAATTACTACCAATCAAGCAGATTAATAGAAAAGAGTGATGTTTATAGTTTTGGAGTTGTTCTTTTGGAGTTAGGAGAAGACTTTGACTGTAGCTCTGCCTGGAAAATTGTGGAAATAGCACTGACTTGTGTGTCTCAAAACTCTAATGAAAGGCCAATCATGAGTGAGGTGTTGATTGAACTAAAGAACGCTTTGGCCATGGTTAAGTCAAACAAACTATGGTGGTGGTGTCAACAATAA 405 0.3877 SAIFLTSKANNVKASNILLTTCTKLSDFGLSKSIPTDGRSHVSTVVAGTADYLDPNYYQSSRLIEKSDVYSFGVVLLELGEDFDCSSAWKIVEIALTCVSQNSNERPIMSEVLIELKNALAMVKSNKLWWWCQQ* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0374 134 PANTHER OS07G0107800 PROTEIN-RELATED 79 125 - -
Amo18g0374 134 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 79 125 - -
Amo18g0374 134 Gene3D Transferase(Phosphotransferase) domain 1 9 128 - -
Amo18g0374 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0374 134 SUPERFAMILY Protein kinase-like (PK-like) 11 123 IPR011009 -
Amo18g0374 134 PANTHER OS07G0107800 PROTEIN-RELATED 12 79 - -
Amo18g0374 134 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 12 79 - -
Amo18g0374 134 Pfam Protein tyrosine and serine/threonine kinase 11 79 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0374 Amo-Chr18 4925626 4927018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0374 11 127 Receptor kinase-like Gene Family AT1G51880 44.872 3.69e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo18g0374 PK_Tyr_Ser-Thr 4.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0374 - - adu:107492765 135.576