Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0373 ATGACGAAAGGGAGGATCAGGGCAAGGATCCGCAGGAGCCACCTTTATACATTTGGTTGCCTTCGGCCACAGACCACTGAGGAAGGAGGGCCTCATCCTCTCCAGCTCCATGGTCCCGGGTATTCGMGAACTGTGTATTGCAACCAGCCACTAATTCATGAGAAGAAATCCCTATTTTACTGCAACAATAACATATCAACTACCAAGTACAATGTCCTCACATTCTTGCCTAAGGCACTCTTTGAGCAATTCCGAAGGGTGGCTAACATATACTTCCTTTTGGCTGCTTGCCTCTCAGCCTCTCCAATTTCACCTTTCAGCCCTCTGAGCATGATTGCTCCTCTGGCATTTGTTGTGGGTCTTAGTATGGCGAAGGAAGCATTGGAGGATTCCCGCAGGTTCCTTCAGGATGTCAAGGTTAATAACCGGAAAGTTAGTGTCCATAAAAGTAATGGTGAGTTTGTCCCCAGGTCTTGGCAGAGAGTTATGGTTGGGGATGTTGTAAAAGTAGAGAAGGACCAATTTTTTCCAGCAGACTTGCTTCTACTGTCATCAAGTTATGAGGATGGGATATGTTATGTGGAAACAATGAATTTGGACGGCGAAACCAACTTGAAGGTGAAGAGATCTTTGGAGGCAACCCTGTCTCTGGATAATGATGGAGCCTTTTGGGATTTCTCAGGAACAATACATTGTGAAGACCCAAATCCCAATCTCTATAGCTTTGTTGGCAACTTTGAGTATGAACGTCAGGTTTATCCTCTTGATCCTAGTCAAATTCTCCTTCGCGATTCAAAGCTTAGGAATACTGATTATATCTATGGGGTGGTCATTTTCACTGGTCATGATAGCAAAGTCATGCAGAATTCTACAAAATCCCCGTCAAAAAGGAGCACAATAGAGAAAAAGATGGATCATATAATATACACTCTCTTCACCGTCCTCATATTGATTTCATTTATTAGTTCAATAGGATTTGTTGTGAAGACCAAGTTCCAAGTCCCAAAGTGGTGGTATCTGCAGCCGGATAACATCGAATACCAGTATGATCCTAAGAAGATTATGTTGGCTGGGATGAGCCATTTGATTACTGCACTGATTCTTTATGGATATTTGATACCTATCTCACTTTATGTTTCAATTGAGATTGTGAAGGTATTACAAGCGTCTTTCATTAACCAAGACATTCAAATGTATGATGAAGAAACTGGGACACCAGCTGATGCACGGACATCAAATTTAAATGAAGAATTGGGTCAGGTAGACACTATCCTCTCTGATAAGACTGGAACTTTAACCTGCAATCAGATGGACTTTTTGAAGTGCTCCATTGCTGGTACTTCTTATGGTGTACGCTCCAGTGAAGTTGAACTTGCTGCTGCAAAGCAGATGGCTTCTGATATGGAGGAGCAGGATACGGAATCAGATCTCTCTAATTTCCCCATGATTAAGGGTAGAGTTCCACGACAAAATGTTAGAAGAGCAGAAGAAATTGAACTTGAGACTGTTGTAACTTCCAAAGGAGATGAGGATAAAAGGCCTGCAATAAAGGGGTTTGGTTTTGAAGACAGCCGCCTCATGAATGGTAACTGGTTGAAAGATCCCAAAGCAGATATCATGCTATTGTTTTTCCGGATATTATCAGTTTGCCATACTGCCATTCCTGAGGTGAATGAGGAGACTGGCATTTGTACATATGAAGCTGAGTCACCCGATGAAGGGGCTTTTCTTGTAGCAGCAAGAGAATTTGGTTTTGAGTTTTTYAGAAGAACTCAATCGACTGTTGTTGTACGTGAAAAGTTTTCTGCCTCAGGAGGAGTGGTTGAAAGGGAGTATAAAATATTGAATTTGCTAGATTTTACTAGCAAAAGAAAGCGAATGTCCGTGATTGTTCGTGATGAGGAGGGAAACATTATTCTTTTCTGCAAAGGAGCAGACAGCATTATATTTGATCGATTGTCAGAGAATGGAAAAATGTATTTGGAGGCTACTACTAGGCACCTTAATGAATATGGAGAAAATGGTTTGCGAACACTTGCTCTTGCTTACAAAAGGCTTAATGAGCAAGAGTACACTGAGTGGAACAATGAGTTTCATAAAGCCAGGACTGCTGTTGGGACTGACAGAGAGGCATTGCTTGAGGAGGTATCGGATCTTATGGAAAGGGAGTTGATTCTTATTGGTGCAACTGCTGTGGAAGATAAACTGCAGAAAGGGGTGCCTCAGTGTATTGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTATTGACAGGAGATAAGATGGAAACYGCAATCAACATTGGTTTTGCTTGTAGTTTGCTTCGACAGGGCATGAAGCAAATCTGTATTACTCTGGATTCAGATGCAGTAACCAATGATCGCCTAGAGGTGGTCAAGGGCAACATCTTGAATCAAATCACCAATGCCGCACAAATGATAAATATGGAGAAGGATCCCCATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTAACATATGCTTTAGAAGATGACATGAAGCATCAGTTTTTGGGATTAGCTGTTGACTGTGCATCTGTCATTTGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTGACAAGGTTAGTGAAAGAAGGAACTGGAAAGACCACCTTAGCAATAGGCGATGGTGCCAATGATGTTGGTATGATTCAAGAAGCAGATATTGGTGTGGGAATCAGTGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGACTTTTCTATTGCTCAATTTCGGTTCTTGGAGAGGCTTCTGGTTATCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGCTATTTCTTCTACAAAAATATAGCATTTGGGCTCACCATATTCTATTTTGAGGCCTTTGCGGGATTCTCTGGTCAATCGGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTCACATCATTGCCTGTCATCTCACTTGGAGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTATATCAACAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTCTCTATTCGTCTCTCATTATTTTCTTCCTAGTTATAATCATCTTCTATGATCAAGCATTCCGGATAAATGGCCAAACTGCGGATATGGCTGCYGTCGGTACAACAATGTTCACTTGCATCATCTGCGCTGTCAACTGTCAGATTGCGTTGACAATGAGCCATTTCACATGGATCCAACACCTCTTTGTGTGGGGTAGCATAGCCACATGGTACCTCTTTCTCTTGCTATATGGCGTGCTTCCTCCGAAATATTCCAAGACTGCCTACCAGATATTGATTGAAGTTCTTGCTCCGGCTCCTATTTATTGGACAGCAACACTTCTGGTAACAGTTGCATGCATTCTTCCTTATCTTGCCCACATATCCTTCCAAAGATGTTTTAATCCCATGGATCATCACATCATCCAAGAAATCAAGTACTACAAGAAGGATATCGAAGATCGACACATGTGGACGAGGGAGAGCTCCAAGGCGAGACAAGAAACGAAGATCGGATTCACGGCAAGAGTGGAAGCCAAGATTAGACAATTGAAAGGGAGGCTGCAGAAGAAGCAATCTGCATTGGGGGTTCCATCACCAACTTACACATAA 3687 0.4209 MTKGRIRARIRRSHLYTFGCLRPQTTEEGGPHPLQLHGPGYSRTVYCNQPLIHEKKSLFYCNNNISTTKYNVLTFLPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNNRKVSVHKSNGEFVPRSWQRVMVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEATLSLDNDGAFWDFSGTIHCEDPNPNLYSFVGNFEYERQVYPLDPSQILLRDSKLRNTDYIYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDHIIYTLFTVLILISFISSIGFVVKTKFQVPKWWYLQPDNIEYQYDPKKIMLAGMSHLITALILYGYLIPISLYVSIEIVKVLQASFINQDIQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVELAAAKQMASDMEEQDTESDLSNFPMIKGRVPRQNVRRAEEIELETVVTSKGDEDKRPAIKGFGFEDSRLMNGNWLKDPKADIMLLFFRILSVCHTAIPEVNEETGICTYEAESPDEGAFLVAAREFGFEFFRRTQSTVVVREKFSASGGVVEREYKILNLLDFTSKRKRMSVIVRDEEGNIILFCKGADSIIFDRLSENGKMYLEATTRHLNEYGENGLRTLALAYKRLNEQEYTEWNNEFHKARTAVGTDREALLEEVSDLMERELILIGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITLDSDAVTNDRLEVVKGNILNQITNAAQMINMEKDPHAAFALIIDGKTLTYALEDDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVIHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLVIIIFYDQAFRINGQTADMAAVGTTMFTCIICAVNCQIALTMSHFTWIQHLFVWGSIATWYLFLLLYGVLPPKYSKTAYQILIEVLAPAPIYWTATLLVTVACILPYLAHISFQRCFNPMDHHIIQEIKYYKKDIEDRHMWTRESSKARQETKIGFTARVEAKIRQLKGRLQKKQSALGVPSPTYT* 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0373 1228 Coils Coil 451 471 - -
Amo18g0373 1228 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Amo18g0373 1228 Gene3D - 422 436 IPR023214 -
Amo18g0373 1228 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1223 - -
Amo18g0373 1228 CDD P-type_ATPase_APLT_Dnf-like 62 1036 - -
Amo18g0373 1228 Pfam Phospholipid-translocating ATPase N-terminal 45 112 IPR032631 -
Amo18g0373 1228 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Amo18g0373 1228 PRINTS P-type cation-transporting ATPase superfamily signature 883 902 - -
Amo18g0373 1228 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 526 690 IPR023299 GO:0000166
Amo18g0373 1228 SFLD C1.7: P-type atpase like 408 934 - -
Amo18g0373 1228 Gene3D - 437 473 IPR023299 GO:0000166
Amo18g0373 1228 Gene3D - 575 702 IPR023299 GO:0000166
Amo18g0373 1228 Gene3D - 723 923 IPR023214 -
Amo18g0373 1228 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1223 - -
Amo18g0373 1228 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 855 964 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo18g0373 1228 SUPERFAMILY Calcium ATPase, transduction domain A 148 289 IPR008250 -
Amo18g0373 1228 SUPERFAMILY HAD-like 413 927 IPR036412 -
Amo18g0373 1228 Pfam Phospholipid-translocating P-type ATPase C-terminal 911 1161 IPR032630 -
Amo18g0373 1228 Gene3D - 114 291 - -
Amo18g0373 1228 SFLD p-type atpase 408 934 IPR044492 -
Amo18g0373 1228 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 60 1169 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Amo18g0373 1228 Coils Coil 1199 1219 - -
Amo18g0373 1228 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 1157 IPR023298 -
Amo18g0373 1228 Pfam Cation transport ATPase (P-type) 567 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0373 Amo-Chr18 4899943 4906268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0373 1 1220 Primary Pumps ATPases AT1G17500 74.426 0.0 1927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0373 K01530 - gmx:100778710 2162.11