Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0367 ATGGCTTCGTCGTCTTCTCTGTCCGTTGCTTCTGAAAGCAAATATGATATCTTCCTTAGCTTCAGAGGCATAGATACCAGACGTGGTTTTCTCAGCCATCTGATTAAGGCTTTAAACCAAAAACAGATTGAGATCTATGTAGACTATAAGCTCAGAGAAGGAACCCAAATATCACACTCACTCCTTACTGCCATTGAAGAATCAGAGATTTCCTTGATTATATTCTCCCAAGATTATGCTTCATCCAAGTGGTGCTTGGATGAACTCGTCAAAATAATGAAGTGCAGGAAAGAGAAAGGTCAAACAGCAATACCTATATTTTATGATGTAGATCCATCTTGTGTACGACATCAAAGGGGAAGTTATGTCGATGCACTTTCCGGCCATCGGAAAACGTCATCGGCGGGGCAGTTGCTAATATGGAAAGAAGCTCTCAACGAGGCTGCCAATTTGTCTGGACTGCATTCATCCAACTTTGGGAGTGATGCTGCTCTTATTGACGAAATTGTCAAACGCGTGTTACAAAGGTTGAATGAAAAGTGCCAAGGAGATTTACAAGGACTTGTTGGAATGTATGAACCAATTACAGAGCTAGAATCATTATTGTGCAAGGAATCAAAAGCTGTAGTTATTATTGGACTTTGGGGCATGGGTGGTATTGGAAAGACAACTCTTGCTAGTGTTGTTTTCGATAGGGTATGTCATGAATTTGAAGGACTCTGCTTCTTAGATAATGTAAGAGAAAAAGTCCAGAAATATGGCATAAATCATTTGAAGAAAGAACTTGTATCTAAGCTGCTGGACATTAAAGATGTAGAAAAAGATGTAGTCTCTTTCATCATGCCTATTGGGATAACTGATTTTGCCAAGAGAAGACTCCGTCGCAGAAAAGTTCTTCTTGTTCTTGATGATGTGAGTGATTCTAAGCAACTGGAAGATTTATGTGGAGGACATGATTGGTTTGGGRTAACTAGTAGYATCATGGTGACAACTAGAGATAAACATGTGCTGAATAGAGCCGATCATATTCATGAGGTTAAGGCATTAAATCAGGATGAGTCTCTTGAGCTTTTTAAGTTGAATGCCATGAAACAAAACTACATGGACACAGAGCAAGTTGAGCSATCCATGAGGGTTCTTAACTATGCGAAAGGAATTCCATTAGCCTTAAAAGTTATGGGTTCCTTTCTCTGTGGAAAAAGTAAGCAGGAGTGGAAAAGTCAGCTTCTTAAACTTGAAAAAATGCCTCATGTAGAAATTCAAAATATATTGAGATTGAGCTATAACGAACTAGATCGTCATGATCGGAATATTTTTCTATACCTTGCATGTTTCTTCAAGACAGTTTCAGAAGAGCAGGTTACGTTTCTTCTTGATGCATGCGGATACTCAACAGCTATTGGGTTAAAAACTCTTCAAGACAAAGCTCTTATTTCCATTTTAAGCTGTGAAGTGACAATGCACGACTTGCTTCGAGAAATGGGACGTGAAGTAGTTCGGGAAGAGTCTCCCAATGATCCGGGAAAGCGCAGTAGATTATGGGATTCTACTGATATCTATAAAGTATTGAAATATGACACGGGAACTGAAACTATTGAAAGCATAACATTAGACATGTCAAAAATTGACGTGCTAAGCTTGCATCCTCAGATATTTGCAAGAATGTACAAGCTCAAGTTTTTAAATGTTCATTCATGGGATGGTGAGCATAGGCTCTGTGCTCCTCATGGTATTGAATCCTTGTCAGATGAGCTGAGATTTTTTCAATGGGAAGACTACCCTTCGAAATCTTTACCATTGTCTTTTTGTGCGGAAAATCTTGTGGAAATTATAATGCCMTCTAGTCAGTTGGAGAAGCTTTGGGAAGGTGTCCAGAATCTTGTAAATCTGAAGCTAGTAGATCTTAATTATTCATCACACCTAGTCGAGCTCCCAGATTTCTCCAAGGCCCCAAATCTTGAAGAAGTAAATGTTTCCAKCTGCAAGAGTCTGCAGCAAGTTCCCCAATCTGTTTTGTCTTCTCAAAAGCTGGGTTATCTCTTTCTAAATGATTGTAATGAACTAAGAAGTTTCCAGCACAACATTCATCATCAATCRCTTAAGACACTCTCRTTCCATAGCTGCATTGGTCTCAGAGAGTTCTCMTTGACACAGCTTAACCACGGCACAGACAAATTGGTGTTATCAGCTCCGCTTGAACGGCTAAAACTGGATTACTGTTCCAACCTTTCTCTGCTGCCAGACAATATAAGCATGCTTTCATCATTGAAGGACTTATCAATGAGTCACAGCAGTGTGAGAAGCTTGCCTGAAAGCATTAAGCATCTGTCACGGCTGAAATACCTCAACTTGAGTAATTGCAAGAGGCTTCAATCAATACCAGAGCTTCCATCGTCCATTTTGGGGTTAATTGCTGTTAACTGCACATCATTACATACTGTTTTCATGGCTGAACCAATCAAAGAAGAGAAATTCGGATATAAAACATTTGCATTTACCAATTGTGTTAAGTTGGAGAAGGCTACAATCCAGGCCATTATGGCAAACGCCTATGTCAGAATACAGCAAGCAGCAAACGCATGGCTACCAACAGWACAGAGGAATGAGTACTATTATGCAAKCTTTGATAATAARTATGAACTCAGGGTTCATGTTTGCTTACCAGGAAGCCAAGTTCCAGGATGGTTCAGCTATAGAACAACCGAAACTTGCATGACTGTTGAACTTGTCCTACTTGCTTCTAGTATCAGTAMGTTCCGAGGTTTCATCTTCTGTGCTGTTCTTCCTCCTAGAGAGGAAAAAGGCTTAGGCTCGGKAAMTTTGAYATGTTCTTACTTCATTGAAACGAGTGATGGTCCAAGCMTGWGRYYTCAWAGTTCGTGGGTGATATATGACCGTYCAGTTGATAAGGAATCRGACAATGTGTATATGTGGTATGATAGGCAATGCTGCATTGATATGATGAGGAGAACCAAACAAGGCAAAGGAAGTGATGAAGATAATGTTCATAAGTACAAGGTSTTATTTGASTTCCATTACTCCCTTAATTCCACAGGAATAAAAGAGTGTGGTGTCCATCCAATATATGTCTCGGATACTAAATCCAAGAGAAGACCAGAGATAACTCAAGTTGATGAGAACCAAGGTGATCTAGAGCTGCAAGAACCACTTTCTTCCACAAATAAGAACTTTAAAATGGAATACTTTTCTTCAAGGGAGTTTTCTGCTACACAGCTCAGCAGCAAGGATGATCAAGGGCAGAATGGGAAAATTACTCCTTTTCAATTCATGTATAGGAGGAGAGCGAAGAAGAAAATAAAGGAATGA 3327 0.3934 MASSSSLSVASESKYDIFLSFRGIDTRRGFLSHLIKALNQKQIEIYVDYKLREGTQISHSLLTAIEESEISLIIFSQDYASSKWCLDELVKIMKCRKEKGQTAIPIFYDVDPSCVRHQRGSYVDALSGHRKTSSAGQLLIWKEALNEAANLSGLHSSNFGSDAALIDEIVKRVLQRLNEKCQGDLQGLVGMYEPITELESLLCKESKAVVIIGLWGMGGIGKTTLASVVFDRVCHEFEGLCFLDNVREKVQKYGINHLKKELVSKLLDIKDVEKDVVSFIMPIGITDFAKRRLRRRKVLLVLDDVSDSKQLEDLCGGHDWFGXTSSIMVTTRDKHVLNRADHIHEVKALNQDESLELFKLNAMKQNYMDTEQVEXSMRVLNYAKGIPLALKVMGSFLCGKSKQEWKSQLLKLEKMPHVEIQNILRLSYNELDRHDRNIFLYLACFFKTVSEEQVTFLLDACGYSTAIGLKTLQDKALISILSCEVTMHDLLREMGREVVREESPNDPGKRSRLWDSTDIYKVLKYDTGTETIESITLDMSKIDVLSLHPQIFARMYKLKFLNVHSWDGEHRLCAPHGIESLSDELRFFQWEDYPSKSLPLSFCAENLVEIIMPSSQLEKLWEGVQNLVNLKLVDLNYSSHLVELPDFSKAPNLEEVNVSXCKSLQQVPQSVLSSQKLGYLFLNDCNELRSFQHNIHHQSLKTLSFHSCIGLREFSLTQLNHGTDKLVLSAPLERLKLDYCSNLSLLPDNISMLSSLKDLSMSHSSVRSLPESIKHLSRLKYLNLSNCKRLQSIPELPSSILGLIAVNCTSLHTVFMAEPIKEEKFGYKTFAFTNCVKLEKATIQAIMANAYVRIQQAANAWLPTXQRNEYYYAXFDNKYELRVHVCLPGSQVPGWFSYRTTETCMTVELVLLASSISXFRGFIFCAVLPPREEKGLGSXXLXCSYFIETSDGPSXXXXSSWVIYDRXVDKESDNVYMWYDRQCCIDMMRRTKQGKGSDEDNVHKYKVLFXFHYSLNSTGIKECGVHPIYVSDTKSKRRPEITQVDENQGDLELQEPLSSTNKNFKMEYFSSREFSATQLSSKDDQGQNGKITPFQFMYRRRAKKKIKE* 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0367 1108 SUPERFAMILY "Winged helix" DNA-binding domain 419 524 IPR036390 -
Amo18g0367 1108 Gene3D Ribonuclease Inhibitor 524 717 IPR032675 -
Amo18g0367 1108 Gene3D Ribonuclease Inhibitor 718 813 IPR032675 -
Amo18g0367 1108 Pfam NB-ARC domain 200 432 IPR002182 GO:0043531
Amo18g0367 1108 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 153 IPR035897 -
Amo18g0367 1108 Coils Coil 255 275 - -
Amo18g0367 1108 Gene3D - 174 347 IPR027417 -
Amo18g0367 1108 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 1010 IPR044974 GO:0006952
Amo18g0367 1108 Gene3D - 11 173 IPR035897 -
Amo18g0367 1108 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 1010 - -
Amo18g0367 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 442 IPR027417 -
Amo18g0367 1108 ProSiteProfiles TIR domain profile. 13 177 IPR000157 GO:0007165
Amo18g0367 1108 Pfam C-JID domain 887 1033 IPR045344 -
Amo18g0367 1108 SUPERFAMILY L domain-like 500 818 - -
Amo18g0367 1108 Pfam Leucine Rich Repeat 606 625 IPR011713 -
Amo18g0367 1108 PRINTS Disease resistance protein signature 292 306 - -
Amo18g0367 1108 PRINTS Disease resistance protein signature 774 790 - -
Amo18g0367 1108 PRINTS Disease resistance protein signature 383 397 - -
Amo18g0367 1108 PRINTS Disease resistance protein signature 211 226 - -
Amo18g0367 1108 Gene3D - 348 432 IPR042197 -
Amo18g0367 1108 Pfam TIR domain 14 182 IPR000157 GO:0007165
Amo18g0367 1108 SMART till_3 14 151 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0367 Amo-Chr18 4826385 4830680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0367 10 807 WRKY Transcription Factor Family AT4G12020 31.039 5.76e-102 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0367 - - aip:107613764 2115.5