Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0366 ATGCATGACTTAATTCGAGAAATGGGCCGTGAAATTGTTCGCGGAGAATGTCTAGATGATCCAGGAAAACGCAGTAGACTATGGCATTCTTATGATACCTATGAAGTACTGAAATACAATAAGGGAACTCAAGCTATTCAAAGTATCACATTAAATATGTCTGAAATTGATATGATAAGGTTGCACCCTGAGACATTTGAAAGAATGCCAGAACTGAAGCTTGTTAGATTTCATTCATCCAATTCCAAAAACAAGTTGTGTGCTCCAGAAGGTATTACATCCCTGCCAAAGAAGTTAAGGTATTTTCATTGGGATGGGTTTCCTTTGAAATCTTTGCCGTCTTCTTTTGGTGCTGAGAGATTTGTTGAAATCATAATGCCCAATAGTGGATTGCAAACGCTTTGGGAAGGTGAACAGAATCTTGTAAATCTAAGGAAAGTGGATCTTGATGGTTCATCAAGCCTAATGGAGCTCCCAGATTTATCAAAAGCTTCAAATCTTAGAGAAGTGAGTATCTCTGGTTGCAAGAGTCTGCGTCAAGTTCCTCCATCTGCTGTGTGTTCCCAGAAGCTGAAATACCTGAAAGTGAGCAACTGTGAGAGCCTTGAATCCATAGCAGAGCTTCCAGCATCGGTTGTGTGCGTAATTGCTCGCAACTGCCGCTCACTACACACTGTATCTTTATCTGCTTTGGATTCTATGGCCAAAGAACCGATCCAGCAGCAGCAATTTGAGGATATAACCTTCAATTTCACCAACTGCAACAAATTGAGAAGGAATTCAAAAAAGAGCATTATGGAACATGCCTATGGCAGACTAAAGCGACCACTAGCAGCAGCACCAACATGTGCTACAACAGCATGGCTGGATAAGGAGGATAAGCACCCGTTTCGTTATCTTTCAGGCAAGCAGCACAATCATCCCAAGTTAAATGTGTTGTCAGGTGCAGCCCCGGAATGGTTCAGATATAAAAACCCACAAAGAGGGGCTGTTACTCTTGATGTTGCCCCAGGTGATAACTTGTTGGGTTTCATCTTTTGGATCATTTTTCCTGCATACTATGGGAGTCACGAAGTGCAAGCCACTTCAGTGTCATATAAGTATCGCGTTAAAGTGATGCATGGCCCAAGTTTCAGCTATGACGGGTATTGGTTTCTAGGCGAGAATATATGGCTTAACGATAGCTATTTTTGGTACGACGGGCAATGCTGCATTGACATGATCAAGGTAATGGAAGAAAACACCGACACTAATAATAATAATAGCATTCAACTCATGGTTTCATTCCAGTTCTTCTACACTCGTCTTGTTTTGAGTTACCGTTACCCTATTGAGGAAGATGTTAACAAAGAAATAGAAGATTGGGCTGTGCACCCAATATATGCCTCAGACGTTCGAAACTTCAAAGATTGGAGTGTGCATCCAATATATGCCTCAGATGTTCGAAACTGA 1452 0.4153 MHDLIREMGREIVRGECLDDPGKRSRLWHSYDTYEVLKYNKGTQAIQSITLNMSEIDMIRLHPETFERMPELKLVRFHSSNSKNKLCAPEGITSLPKKLRYFHWDGFPLKSLPSSFGAERFVEIIMPNSGLQTLWEGEQNLVNLRKVDLDGSSSLMELPDLSKASNLREVSISGCKSLRQVPPSAVCSQKLKYLKVSNCESLESIAELPASVVCVIARNCRSLHTVSLSALDSMAKEPIQQQQFEDITFNFTNCNKLRRNSKKSIMEHAYGRLKRPLAAAPTCATTAWLDKEDKHPFRYLSGKQHNHPKLNVLSGAAPEWFRYKNPQRGAVTLDVAPGDNLLGFIFWIIFPAYYGSHEVQATSVSYKYRVKVMHGPSFSYDGYWFLGENIWLNDSYFWYDGQCCIDMIKVMEENTDTNNNNSIQLMVSFQFFYTRLVLSYRYPIEEDVNKEIEDWAVHPIYASDVRNFKDWSVHPIYASDVRN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0366 483 Pfam Leucine Rich Repeat 122 139 IPR011713 -
Amo18g0366 483 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 229 IPR044974 GO:0006952
Amo18g0366 483 SUPERFAMILY L domain-like 13 230 - -
Amo18g0366 483 Gene3D Ribonuclease Inhibitor 37 263 IPR032675 -
Amo18g0366 483 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0366 Amo-Chr18 4816164 4825983 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0366 1 238 WRKY Transcription Factor Family AT4G12020 35.484 7.47e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0366 - - adu:107461399 940.643