Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0364 ATGTATATGAGAGGTAAATGTGGAAATAGAAAAACTGATATCCGAGAAGAAGAAGCAGGGAAGAGAATCGAGAGGTCTTCATCTTCTGCCAAGATGCCAAGAACCCAATTACGCAAAATTGATGGCCTTAGAGAAGTAGAAGATTTCGGAAGGACCGTTCCTTTTGAGTTGACTGTCTATCCTGGAGAGGATGTTGTCGCAAAGCTGTGGAAGGTTTGGGAAGCAAGTACTCACTCTAGCTATGCAATTGCAGCCTTCGGTCATATATCAAAAGCCGCAATTGGCAAACCAAACTCAGATTTGTTTCGTATATATGAAGGAGACTTTGAGATTCTGTCTCTGTCTGGACATTATGTGAATGAAGAGGATGGTTCTGCAGATTGGCGTTTGGGCATCACACTGGCTGATTCTGACAGTGATAGAGAGGCTTTTGGTGGCAGCTCCATCAATACATTGATAGCTTCTGACATTGTATCTGTACGTATTATAAACTTTGAGAAAGAAGAAGAAAAGAGCGATGAAACTGGAACTTCCTCTACAATTGGTGGGGTGCTGATGTCCCTGCTCCTTGCTCTTGAGAAGAAAATAATGGGATTCTTTTCGGATCCGATGGTCAACGAGAGTGATAAGGAAAACTAA 639 0.4225 MYMRGKCGNRKTDIREEEAGKRIERSSSSAKMPRTQLRKIDGLREVEDFGRTVPFELTVYPGEDVVAKLWKVWEASTHSSYAIAAFGHISKAAIGKPNSDLFRIYEGDFEILSLSGHYVNEEDGSADWRLGITLADSDSDREAFGGSSINTLIASDIVSVRIINFEKEEEKSDETGTSSTIGGVLMSLLLALEKKIMGFFSDPMVNESDKEN* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0364 212 ProSiteProfiles PPC domain profile profile. 49 187 IPR005175 -
Amo18g0364 212 MobiDBLite consensus disorder prediction 1 31 - -
Amo18g0364 212 Pfam Plants and Prokaryotes Conserved (PCC) domain 55 166 IPR005175 -
Amo18g0364 212 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 7 36 174 - -
Amo18g0364 212 CDD DUF296 54 155 IPR005175 -
Amo18g0364 212 Gene3D - 55 183 - -
Amo18g0364 212 SUPERFAMILY AF0104/ALDC/Ptd012-like 54 176 - -
Amo18g0364 212 MobiDBLite consensus disorder prediction 8 28 - -
Amo18g0364 212 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 36 174 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0364 Amo-Chr18 4802151 4803797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0364 53 199 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 33.553 2.93e-14 68.9