Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0353 ATGGAATCTGAAGCTGTTATTGTTGGCCTTTGGGGCATGGGCGGCGTTGGTAAGACAACTCTTGCGACTGCAGTTTTCAATAGATTGTGTGATGGATTTGAAGGATTTTGCTTTTTGAACAATGTAAGAGAAAGAGCTGAGAAATATGGTATAGATCATTTGAAGACAGAACTTCTTTCCAAACTGCTAAAGGAAGAAGATGCAAGTCCCTTTGTCACGCCTGGTGGGATAACTAATTTTGCCAAGAAAYGACTTAGTCGAACAAAGGTTCTTGTTGTTCTTGATGATGTCAATGATTCAGATCAAATGGAAGATTTATCTGGAGGACATACATGGTTTGAGGCAAGTAGCAGAATCATAGTGACAACAAGAGATAAGTATGTTCTTGCTACAGCTGATGCAGATCATATACATGAAGTTAAGACATTGAATCCTGATGAATCTCTTRGGCTTTTCAACTTGAATGCCTTTAAGCAAAACTGCGTTATAAAAGCATAA 498 0.3815 MESEAVIVGLWGMGGVGKTTLATAVFNRLCDGFEGFCFLNNVRERAEKYGIDHLKTELLSKLLKEEDASPFVTPGGITNFAKKXLSRTKVLVVLDDVNDSDQMEDLSGGHTWFEASSRIIVTTRDKYVLATADADHIHEVKTLNPDESLXLFNLNAFKQNCVIKA* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0353 165 Gene3D - 1 138 IPR027417 -
Amo18g0353 165 Pfam NB-ARC domain 2 160 IPR002182 GO:0043531
Amo18g0353 165 PRINTS Disease resistance protein signature 7 22 - -
Amo18g0353 165 PRINTS Disease resistance protein signature 84 98 - -
Amo18g0353 165 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 161 IPR044974 GO:0006952
Amo18g0353 165 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 4 161 - -
Amo18g0353 165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 161 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0353 Amo-Chr18 4748214 4748711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0353 8 156 WRKY Transcription Factor Family AT5G45050 38.411 3.76e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0353 - - aip:107610282 309.686