Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0332 ATGAACTTGGGTGCTGCCAAGGAAGAATCGACACCAGAGGTTCATGTCCCAGCCGATATTGATTGGCAGAAGCTCGATAAATCCAAGTTCTTCTTCCTCGGCGCAGCACTTTTCTCTGGGGTTTCAGCAGCACTGTACCCCGTTGTGGTATTGAAAACGAGGCAGCAAGTTGCTCAGTCCCAAGTTCCTTGCATCAAGACTGCATTTTCAGTGATTAGCCATGAGGGTTTTCGAGCATTGTATAGAGGGTTTGGTACCTCTTTGATGGGAACAATCCCTGCTAGAGCCATGTACATGGCTGCTTTAGAGATCACTAAGAGTAATGTAGGCACTGCCACTGTTAGGTTTGGGATAGCTGAGCCGACTGCAGCCACGATCGCCAATGCGGTGGCCGGACTGAGTGCAGCCATGGCAGCTCAGCTTGTGTGGACCCCAGTCGACGTAGTGAGCCAGAGGCTAATGGTTCAAGGTGGTTCCAATGCAAGACAATATGCCAATGGGATTGATGCATTCAGGAAGATTCTCAGAACAGATGGTCCTAGAGGGTTGTACAGAGGTTTTGGGATATCAATTTTGACATATGCACCTTCAAATGCTGTTTGGTGGGCTTCATATTCTGTTGCACAGAGAATGGTTTGGGGTGGTGTTGGATACTACTTGTGCAGCAATAAGAAGGATGATGGTGAGACAACAAACGAACTGAGGCCGGATTCGAAGACAGTAATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCTGGTGGCATGTCCGCATTAATCACCATGCCATTGGATACAATTAAGACAAGGCTGCAGGTCTTGGATGGTGATGAGAATGGCAATGGGCGTAGAGTACCAACGGTTGTTCAGACAGTGAGGAATTTAGTTAAGGAAGGTGGTTGGATGGCATGTTACAGAGGTTTGGGACCAAGATGGGCTTCAATGTCTTTGTCTGCAACAACAATGATCACTACTTATGAGTTCCTTAAACGACTTTCTACAAAGAATCAGGATGTTTTGACATGA 1023 0.4731 MNLGAAKEESTPEVHVPADIDWQKLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVAQSQVPCIKTAFSVISHEGFRALYRGFGTSLMGTIPARAMYMAALEITKSNVGTATVRFGIAEPTAATIANAVAGLSAAMAAQLVWTPVDVVSQRLMVQGGSNARQYANGIDAFRKILRTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGYYLCSNKKDDGETTNELRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGNGRRVPTVVQTVRNLVKEGGWMACYRGLGPRWASMSLSATTMITTYEFLKRLSTKNQDVLT* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0332 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 211 IPR018108 -
Amo18g0332 340 Pfam Mitochondrial carrier protein 125 212 IPR018108 -
Amo18g0332 340 Pfam Mitochondrial carrier protein 243 335 IPR018108 -
Amo18g0332 340 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Amo18g0332 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Amo18g0332 340 Gene3D Mitochondrial carrier domain 29 338 IPR023395 -
Amo18g0332 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 337 - -
Amo18g0332 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 337 - -
Amo18g0332 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 240 331 IPR018108 -
Amo18g0332 340 SUPERFAMILY Mitochondrial carrier 23 328 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0332 Amo-Chr18 4571484 4573329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0332 1 337 Chloroplast and Mitochondria Gene Families AT1G72820 74.927 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0332 K15121 - gmx:100784616 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0332 18 4571484 4573329 Amo18g0332 18 4571484 4573329 ECH