Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0330 ATGTATATGAGAGGTAAATGTGGAAATAGAAAAACTGATATCCGAGAAGAAGAAGCAGGGAAGAGAATCGAGAGGTCTTCATCTTCTGCCAAGATGCCAAGAACCCAATTACGCAAAATTGATGGCCTTAGAGAAGTAGAAGATTTCGGAAGGACCGTTCCTTTTGAGTTGACTGTCTATCCCGGAGAGGATGTGGTCGCAAAGCTATGGAAGGTTTGGGAAGCAAGTACTCACTCTAGCTATGCAATTGCAGCCTTCGGGCATATATCAAAAGCCGCAATTGGCAAACCAAACTCAGATTTGTTTCATATATATGAAGGAGATTTTGAGATTCTGTCTTTGTCTGGACATTTCGTGAATGAAGAGGATGGTTCTGTAGATTGGCGTTTGGGCATCACACTGGCTGATTCTGACAGTGATAAAGAGGCTTTTGGTGGCAGCTCCATCAATACATTAATAGCTTCTGACACTCCATCAAATTACTTTCTTGAATTGTAA 498 0.4157 MYMRGKCGNRKTDIREEEAGKRIERSSSSAKMPRTQLRKIDGLREVEDFGRTVPFELTVYPGEDVVAKLWKVWEASTHSSYAIAAFGHISKAAIGKPNSDLFHIYEGDFEILSLSGHFVNEEDGSVDWRLGITLADSDSDKEAFGGSSINTLIASDTPSNYFLEL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0330 165 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 36 155 IPR039605 GO:0003680
Amo18g0330 165 Pfam Plants and Prokaryotes Conserved (PCC) domain 55 157 IPR005175 -
Amo18g0330 165 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 7 36 155 - -
Amo18g0330 165 MobiDBLite consensus disorder prediction 1 31 - -
Amo18g0330 165 Gene3D - 55 161 - -
Amo18g0330 165 CDD DUF296 54 155 IPR005175 -
Amo18g0330 165 SUPERFAMILY AF0104/ALDC/Ptd012-like 54 154 - -
Amo18g0330 165 MobiDBLite consensus disorder prediction 8 28 - -
Amo18g0330 165 ProSiteProfiles PPC domain profile profile. 49 165 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0330 Amo-Chr18 4534805 4536515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0330 53 155 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 35.577 9.41e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0330 - - aip:107613024 248.825