Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0326 ATGCTTCTTCCAAACACACTAGCCAAAATAATGGAATGCAGGAAACAAAATGGTCAAATTGTAATACCTTTTTTCCATAATGTAGACACATCATGGGTGCGCCACCAAAAGGAAAGTTATCACCATGCGCTTGCTAATCATGAGGTGTGGTTTGCAGACAGGGTGCAAATCTGGAGAGATGCTCTCAAGGAAGCTGCCAATTTGTCTGGATTGCATTCACCATCATCAAGCTTCAGGAATGATGCTGAATTCATTGATGAAATTGTCAAACGGGTCATACAAAAGTTAAACCAAACATGCCAAGGTGATCTGATGCAGGGTCTTGTTGGAATTCATGAACCAATTGGAAAGCTAGAATCATTGCTGTGCACGGCATCAGAAGCCGTTTCTATTATTGGCCTTTGGGGCATGGGTGGTGTTGGTAAGACCACTCTTGCTAGAGCACTTTTCCATATATTTTGTAATGGATTTGAAAGATTTTGCTTTTTGGACAATGTAAGATAA 504 0.4067 MLLPNTLAKIMECRKQNGQIVIPFFHNVDTSWVRHQKESYHHALANHEVWFADRVQIWRDALKEAANLSGLHSPSSSFRNDAEFIDEIVKRVIQKLNQTCQGDLMQGLVGIHEPIGKLESLLCTASEAVSIIGLWGMGGVGKTTLARALFHIFCNGFERFCFLDNVR* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0326 167 Gene3D - 100 167 IPR027417 -
Amo18g0326 167 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 70 IPR035897 -
Amo18g0326 167 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 167 IPR044974 GO:0006952
Amo18g0326 167 Pfam TIR domain 7 110 IPR000157 GO:0007165
Amo18g0326 167 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 167 - -
Amo18g0326 167 ProSiteProfiles TIR domain profile. 1 96 IPR000157 GO:0007165
Amo18g0326 167 Gene3D - 3 99 IPR035897 -
Amo18g0326 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 166 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0326 Amo-Chr18 4475923 4479483 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0326 3 166 WRKY Transcription Factor Family AT4G12020 26.829 1.73e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0326 - - adu:107461396 256.914