Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0311 ATGGCGTACCAGGCCCCCGATAATGAACCGGACACCGATTCCAAGAAAGAAATCCGCCTCTACAACCCATACAAGGACCTTGGGATTCCAAATCAAAACCTCTACCATCTCCCATCCTCGCCGGAGTACCTCTTCATCGAGGAGGCTGAACGTAAGCGTCGATCCTGGGGTGAGAACCTCACCTTCTACACTGGCTGCGGTTACCTCGGTGGCGCCATCGGCGGCGGCGCTCGAGGCCTAGTAGACGGCGTCAAATCCTTCGAGGCRGGCGACACGCTCAAGCTCCGGATCAACCGTATTCTGAACTCTTCCGGCCACACTGGACGTACTTGGGGGAACCGTCTCGGCATCATAGGGTTGCTCTATTCCGGGATTGAGAGCGCAATGATGGAGACGAGAGACACCGACGACGTGTGGAACAGCGTGGTGGCGGGGCTCGGCACCGGAGCGCTGTATAGGATTTCGGGAGGCGTGAGATCTGCGGCCGTGGCAGGCGCAGTTGGAGTAGTGGTGGCCGGAACTGTCGTGACGGTTAAGCAGGCTTTCAAACGCTACGCACATCTTGCGTGA 570 0.5825 MAYQAPDNEPDTDSKKEIRLYNPYKDLGIPNQNLYHLPSSPEYLFIEEAERKRRSWGENLTFYTGCGYLGGAIGGGARGLVDGVKSFEAGDTLKLRINRILNSSGHTGRTWGNRLGIIGLLYSGIESAMMETRDTDDVWNSVVAGLGTGALYRISGGVRSAAVAGAVGVVVAGTVVTVKQAFKRYAHLA* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0311 189 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 172 - -
Amo18g0311 189 PANTHER TIM23 1 186 IPR045238 GO:0022857
Amo18g0311 189 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0311 Amo-Chr18 4373726 4374739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0311 5 188 Chloroplast and Mitochondria Gene Families AT1G72750 63.102 1.04e-72 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0311 K17794 - gmx:100813158 246.899