Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0299 ATGCCTATCAATGGAGTTGAGATGATGAGGATGGGGATCATGTCAGTCATGATTCACGGAGATTCTTCTAAACCGGTGAAACATGTTAATGATCATAGTAGTGGTTTTGTTCTAGTGATGGATCCTCACAAAGAGAGAATTAAGACTGGATGCCACAAAATCCTGGACGGAATGAACTCAATGTCTTTGGTGAATTTAGATGACCAGCAAGTCCATTCCTTGGTAATGATGAGAGAAATTGCACGCGGGGTTGTTGATGATCAAAATAGGAAGGTGACTAGGAATGATGTGATTCGTGCCTTGCGCCGCAGCATCTTGAAAATGGTGTGTGCATCGAGGGATATCATTCGATTATTGAGTAGGATGTCTTACGAAGGCTTGGATGACCAACAGATGAATTTATTGTTGAGAATGAACGAAATTGCTCATCGGATTATTGATAAACAGCCTAGAGTTGCAATAGCTAGGCCTAATTTACTTGTAGAACAAGTTGCACTTTTGGATGAAGGGATGAGAGATAGTCCTGTGGTTGAGTCGAGTAAGATCGGGGATGCTCTGATTGATGGGGCTCAAAGCATGAGTAATGATGATGATATGTTAGATGTGGAACATGTTTTAAGATTTGAAAATGGGATGAATGTTGCACAGGAGTCTCTATCGCCATCATGCTTCCAGCAATTTCTTCTGTGGCCTCCTGACAATTGCATCACTTTAGAATGGGTTCAGGATATGATGTCCACATTTGAGCATGTTTCACAGAAGGTGTTGCCATCTGCATTTTGTAATATTGTGCCAACCATTTTGGTGGATAAGTTGACAGATGCTGCTTCCAGTATTTTATGTGAGGAACCAAATTGTGTGGAGGTTGACTGTGAAGGAGAAGATTCAAGGGTCATCGTAGTAGGCGATATACATGGGCAGTTTCATGATTTATTGTCTCTCTTCAAGCATGCAGGAGTGCCCTCGGAGAGCCAATTTTATGTTTTCAATGGGAATTATGTAGGTAAAGGAGCTTGGGGCATTGAAGTACTTTTGGTCTTGCTAGCTTGGAAGGTGTTGATGCCTCACAGAATATATCTGCTCTGTGGAAATCATGAATCAAGATATTACACCGGAAGGTATGGTTTTGAGAACGAAGTATGGACCAAATATGGTAAACAAGGAGAATATGTATACAACAAATTTTTGGAGTGCTTCAAGGTGCTTCCGTTAGCTTCAGTTATAGCAAACTGTGTTTATACTACTCATGGAGGGTTTTTCCGTAGCAAACATTCTGCTCCTTCACGAAAGCCAAAACATAGGAAGACACAAAGGGTGGATCTTGGTTCTTTGGCTGAGTTATCTGAAGTTAAAAGAGCTCGTATTGGTTCCCCTTATGAAGGTCCTAATATATTATTGACTGACATCCTCTGGTCAAAACCATCTAAAAGGAATGGTCTAAGGGAGAATGCAGGTCGAAAGTATGGTTTATGGTGGGGTCCTGATTGCACCGAGGCTTTCTTAAAACGACACAATTTAAAGCTGATCATCAGATCACATGAAGGGCCTGATGCAAGGGCTGGTCAGGATGATTTTGGGAACATGATGATTGGATATAGCTTGGATCACGATGTAGAATCAGGAAAGCTATATACACTTTTTAGTGCTCCAGACTACCCACAGTTTGGTCAAAAGAGATATAATAATGAAGGAGCATATGCAATATTGCAGTCTCCAGATTTTGCAAGTCCTTCCTTTTTCTCATTCAAAGCTGCAGAAAGACCAACGGTGGATCCTTATGTTGATTCTGATGCTGATGAGATGGACTTGCCTGCGCCAAGTTCTTCCCAAATAGCCTCAACCTCTGCTTTCTGTGCTTCTCAAAGACCATATCCAGGTGGCTCGAGACCCATTTTTGATTTTAGTTTGTTGGGCATAGACAATGGACCATCTTGGAGCGTTGAGCTTGGAGATGGTTTAGGTGGCACTCAAGTTATGCAGGTTCCGAGGGCCCCCGTGGTGGAAGGCTTGCCGCTTCCTCCCAACATACAGGAGCCGCACCGGTCTGCGTACAAGTATTTGTTCGAGCTGGTTGGTGCATTGAAACATGTGGTTGTAACAAGGGAGACTGAGAACAGGGCCCGTGTGTCAGCATTGAGAAGCAGAGCCAAGAAACGAAAGAGAAGGAAGATTGGACACGTGGTGATGCGTGACGGGCTCGCGTTTGTTCTACAGGAGCCGCACCGGTCTGCATACAAGTATTTGTTCGAGCTGGAGACTGTGAACAGGGCCCGTGTGTCAGCATTGAGAAGCAGAACCAAGAAACGAAAGGGTAGGAAGAGTAATAGTTGA 2331 0.4341 MPINGVEMMRMGIMSVMIHGDSSKPVKHVNDHSSGFVLVMDPHKERIKTGCHKILDGMNSMSLVNLDDQQVHSLVMMREIARGVVDDQNRKVTRNDVIRALRRSILKMVCASRDIIRLLSRMSYEGLDDQQMNLLLRMNEIAHRIIDKQPRVAIARPNLLVEQVALLDEGMRDSPVVESSKIGDALIDGAQSMSNDDDMLDVEHVLRFENGMNVAQESLSPSCFQQFLLWPPDNCITLEWVQDMMSTFEHVSQKVLPSAFCNIVPTILVDKLTDAASSILCEEPNCVEVDCEGEDSRVIVVGDIHGQFHDLLSLFKHAGVPSESQFYVFNGNYVGKGAWGIEVLLVLLAWKVLMPHRIYLLCGNHESRYYTGRYGFENEVWTKYGKQGEYVYNKFLECFKVLPLASVIANCVYTTHGGFFRSKHSAPSRKPKHRKTQRVDLGSLAELSEVKRARIGSPYEGPNILLTDILWSKPSKRNGLRENAGRKYGLWWGPDCTEAFLKRHNLKLIIRSHEGPDARAGQDDFGNMMIGYSLDHDVESGKLYTLFSAPDYPQFGQKRYNNEGAYAILQSPDFASPSFFSFKAAERPTVDPYVDSDADEMDLPAPSSSQIASTSAFCASQRPYPGGSRPIFDFSLLGIDNGPSWSVELGDGLGGTQVMQVPRAPVVEGLPLPPNIQEPHRSAYKYLFELVGALKHVVVTRETENRARVSALRSRAKKRKRRKIGHVVMRDGLAFVLQEPHRSAYKYLFELETVNRARVSALRSRTKKRKGRKSNS* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0299 776 PRINTS Serine/threonine phosphatase family signature 327 354 IPR006186 GO:0016787
Amo18g0299 776 PRINTS Serine/threonine phosphatase family signature 397 423 IPR006186 GO:0016787
Amo18g0299 776 PRINTS Serine/threonine phosphatase family signature 297 324 IPR006186 GO:0016787
Amo18g0299 776 PRINTS Serine/threonine phosphatase family signature 542 558 IPR006186 GO:0016787
Amo18g0299 776 PRINTS Serine/threonine phosphatase family signature 360 384 IPR006186 GO:0016787
Amo18g0299 776 Pfam Calcineurin-like phosphoesterase 297 516 IPR004843 GO:0016787
Amo18g0299 776 SUPERFAMILY Metallo-dependent phosphatases 259 592 IPR029052 -
Amo18g0299 776 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 43 707 - -
Amo18g0299 776 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 43 707 - -
Amo18g0299 776 SMART pp2a_7 264 586 IPR006186 GO:0016787
Amo18g0299 776 Gene3D - 232 615 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0299 Amo-Chr18 4144644 4150858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0299 228 508 Calmodulin-binding Proteins AT5G63870 49.828 1.28e-90 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0299 K04460 - gmx:100779241 827.009