Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0286 ATGAGCAAAAAGATCAGCACAACCTCACAGGCTTGCGCTGCTTGTAAGCACCAACGTAGGAAGTGTGGTCCTAACTGCATTCTCGCACCATATTTTCCTCACGATCGCCAAAAACAATTCCTTAACGCTCATAAATTGTTTGGAGTTGGAAGAATGACTGATCTCATCAAACCACTCGGTCCTACCGAGAGAAACATTGCCATGGAAACCATCATCTACGAATCTGAGATGCGAGCCTATGATCCTGTTAACGGTTGTTGTACAGTGATTCAACAGCTTCAATCTGAGATTGAGTACCGTCAAGCTGAGCTTCAACTTGTTCTTCATCGTCTCGCCCTCTTCAAAGCTCAAGCGCAGCAGCAATCTTCGAGTTGCAACCAAGCTAATAACGTTGAAGGAATTCCATTTCAACCGGATCAATATTATGAAGCTACTAACATGGATAGCAATAGCTCCATTACGCATGAAGTGGATCTTAATGCATGGATGATGCAAAACTTGCAATCACCTGCGTTGTTATCACCTTTGGCATTAACCAATGAGAATGAAAATGGCAATGTTGGAGTTGATGATAATAATGGCTATGTTTATGATCAGAAGCATATGCTTGACCTTGGTTTTAAAGAAACCAAATCAAATCATCAAACACCAGTGGAGGGCATGCATTATTCAGGGATGAAGCAAATTTAA 690 0.4159 MSKKISTTSQACAACKHQRRKCGPNCILAPYFPHDRQKQFLNAHKLFGVGRMTDLIKPLGPTERNIAMETIIYESEMRAYDPVNGCCTVIQQLQSEIEYRQAELQLVLHRLALFKAQAQQQSSSCNQANNVEGIPFQPDQYYEATNMDSNSSITHEVDLNAWMMQNLQSPALLSPLALTNENENGNVGVDDNNGYVYDQKHMLDLGFKETKSNHQTPVEGMHYSGMKQI* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0286 229 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Amo18g0286 229 Pfam Lateral organ boundaries (LOB) domain 11 106 IPR004883 -
Amo18g0286 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 165 - -
Amo18g0286 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 7 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0286 Amo-Chr18 3941332 3942410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0286 10 136 AS2 family AT3G13850 51.724 2.04e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo18g0286 LOB 3.7e-34 No_clan