Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0277 ATGCTTAGCCGTCTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATTGAGAAACAGAGTCGTTGCCTTGTCTATGAGCTTGTTCCTAATGGAAGTGTAGAATCCCACTTACATGGTTCAGACAAGGAAACAGGTCCACTTGATTGGGATGCACGGATGAAGATTGCGCTTGGCGCTGCTCGAGGATTGGCTTATCTGCATGAAGATTCAAATCCATGTGTCATACATAGAGACTTCAAGTCTAGCAACATCTTGTTGGAACATGACTTCACACCCAAGGTATCAGATTTTGGATTGGCTAGAACAGCACTTGATGAGAGAAACAAGCACATTTCCACACATGTTATGGGCACATTTGGGTATCTAGCTCCTGAATATGCAATGACAGGACATCTTCTTGTGAAAAGTGATGTTTACAGTTATGGAGTAGTCCTCCTAGAGCTCCTAACCGGGAGAAAGCCTGTGGACTGGTCGCGATCGCCTGGTCAAGAATACCTTGTTGCTTGGGTTCGTCCGCTTCTCACAAGTAAAGAAGGTTTGGAGATGATTATAGACCCGGATATAAAGCACAGCATTTCTCTTGACAGCATACTAAAAGTRGCAGCCATTGCATCCATGTGTGTGCAAGAAGAAGTCACTCAACGCCCTTTCATGGGTGAAGTTGTGCAGGCCTTGAAGTTGGTATGCAGTGAGTTTGAGGAGACAGACTATGCAAGACAGGCAAGTTTTCAAGATGATGTACAAGGGAAATTTTCCAAAAGTTCAGATGAGAGAGTGGATTTTTCTGTGTAA 798 0.4336 MLSRLHHRNLVKLIGICIEKQSRCLVYELVPNGSVESHLHGSDKETGPLDWDARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDWSRSPGQEYLVAWVRPLLTSKEGLEMIIDPDIKHSISLDSILKVAAIASMCVQEEVTQRPFMGEVVQALKLVCSEFEETDYARQASFQDDVQGKFSKSSDERVDFSV* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0277 265 PIRSF ILK 1 246 - -
Amo18g0277 265 SUPERFAMILY Protein kinase-like (PK-like) 2 227 IPR011009 -
Amo18g0277 265 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Amo18g0277 265 PANTHER OS01G0750732 PROTEIN 1 250 - -
Amo18g0277 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Amo18g0277 265 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0277 265 Pfam Protein tyrosine and serine/threonine kinase 1 227 IPR001245 GO:0004672|GO:0006468
Amo18g0277 265 PANTHER OS01G0709500 PROTEIN 1 250 - -
Amo18g0277 265 Gene3D Transferase(Phosphotransferase) domain 1 31 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0277 Amo-Chr18 3804351 3805725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0277 1 254 Receptor kinase-like Gene Family AT5G56890 76.245 3.79e-133 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Amo18g0277 PK_Tyr_Ser-Thr 3.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0277 - - gmx:100814040 456.062