Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0247 ATGGGATATGTTGATGATGCTCCAGTTGCAGTGAAGATGCTTTCTCAATCCTCAGTTCAAGGTTATCAGCAATTCCAAGCAGAGGTTAAGCTTCTAATGAGAGTTCATCACAGAAATTTGACCTCCCTTGTTGGATACTGTAATGAAGGAAGCAATAAGGCTCTCATATACGAGTATATGGCTAATGGAAACCTACATGAACATCTCTCATCAGGATTGGAATATTTACACAATGGTTGCAAGCCACCTATAATCCACAGAGATGTAAAAGCTTCAAACATTTTGTTGACTGAAAACTTGCATGCAAAATTATCTGATTTCGGTTTCTTCGGTATTGTTTTGCTTGAGATCATTACTGGCCAACTTCTTATATCCAAAACTGAGGAAAGAACTCACATAGTTGAATGGCTGCGCGAAAGCGAAAGGGAGGTTGAAGATGGGGGAAAAATGATAGGAATTTTCCTGCTTTTAGTATTTCAACTTCTGTGGAATCTTCCTATCATTGTTCATGCCCAGAATCAATCAGGCTTTGTTAGCATTGATTGTGGACTTGTGGATGAAGCAAGTTACAAAGATGAAACAACTTCCATATATTACATTTCAGATGCCAGCATCATAGACACTGGTGAATGCCACAACATATCACCCAAATATAAGGCCTCTTCACTTGCCAAACAGTTCTGGAATGTTAGAAGTTTCCCAGAAAGAATCAGAAACTGCTACTCCCTTAAGGTCCCTCAAGGAAGAAGCAGCAAGTATCTAATAAGGGCAAGGTTCATGTATGGAAACTATGATGGTAAAGATTCACTTCCTCAATTTGATATCTATCTTGGAACCAAATGGTGGGAATCTCTAGTGTTTGAGGATCCAACCAGTGTAATAACCAAGGAAATCATCTTTGTTGCTTCCTCGGATTATGTTCATGTTTGCTTAGTTAACACCAACAAGGGTACACCTTTCATATCAGCTTTAGAGATTAGAGTTCTTGACAGTGATGCCTATCTGATTAACTCCATGGAGCTTCTCGCCCGGTATGACATAGGATTACAGGAAGATAAAACAGTCAGATACCCAGATGATGTCCATGATAGAATATGGACACCTTACAATTCAAAAGATTGGAAACAGATAAACACTTCTCTTGCTATAGACAAAGAATCAACTTCATACAACTTTTTACCATTACCAGCCTCTACAGTGATGGAAACAGCAGCAATTCCAACAAATAACAATGATAATATAGAATTTAACTTCTATCCCAAGGATAATGCCTCTGCATACTATGTGTACTTCTTCGTTGCCGAAATCCAGAAACTTGAAGCAAATCAATTTAGAGACTTCAACTTTTTTGTGAATGGGTATCTTCTTAATGGTTCTCCAGTGAATCTTAAGTACCTGCAGAGCGTGTATTACATATCAATTTTGGAAAAACCTCGGTTGGAAGTTTGGATTAACAGAACAAGCAGATCAACACTTCCACCTCTTTTCAGTGCCATTGAGATATATATGACTAAGAATTTCTCACAATCACAAACAGACCAAACTGATGCTTCTGCTATCATGAATGTGAAGTCAAATTATGGGATAAAAAGAAATTGGCAAGGAGATCCATGCATTCCACTAAGTTACATGTGGGATGGTGTTAGTTGCAGCTATGCTGGTTCTTCTTCTCCAAGGATCATATACTTGAACTTATCTTCCAGTGGTTTAACTGGAAATATAACATCAGCCATATCCAATTTGAAGTCAATAGAATATTTGGATTTATCAAACAACAGTTTGACAGGATCAGTGCCTTATTTCTTATCTCAACTTCACTCCTTAAGAGTTCTGAACCTGGAAGGGAATCAGCTAACAGGAGCAGTTCCAATGCAACTCAGAGAGAATTCAAATAATGGCATGCTCAAAACCAGCAATAGTAATAAAGTTGTGGTTCCATTGGTGGCATCACTAGGTGGAGCTTTTGTGATTCTGGCAACAGCAATCACTTCTTTCTTCATATTCAAAAGACATAGAGTAGCCTCTGAAATGGGGAATCTGAGAGCATATTCAAGAATAAAGATGGAGTTAGAGTCAAATAAACAGCAATTTAGCTATGCTGAAGTCCAAAAAATTACCAAAAATTTTAAAAGGGTTGTGGGAAAAGGAGCATCTGGAACAGTGTATCATGGCTATGTAGGTGATACTGAAGTTGCTGTCAAAATGCTGTCTCCTTCAGACTCAAACTCAGCCCAAGCATATCTACAATTTCAGGCAGAGGCAAAACTTCTGGCTGTAGCTCATCATAAATGCTTGACACCTCTTATAGGATATTGTGATGATGGCACAAACATGGCTCTCATCTATGAATACATGCCTAATGGAGACTTAGCCTACCACTTATCAGGATTGGAGTATCTACATGAAGGTTGTTGTCCAGGAGTTGTTCACAGAGATATAAAGTCAAAGAACATATTACTAACTGAAAAATTTAGAGGAAAATTGGCTGATTTTGGTTTGGCCAAGATCTACCCTAATGAAAATGATACACACATGTGCACTGTGGTTGCTGGCACCCCCGGATACCTTGATCCGCTGTACCACAGATCAAGCAAGTTGAGTGAAAAAAGTGATGTTTATAGTTTTGGAGTGGTTTTGCTTGAGATAATTACAGGGCATCCAGCCATAACCAAAACAGAAGAGAAAGTTCACATAATTAGATTGGTTGGATCAATGCTTAGTGAAAGGGAGGTGAATGATGTTGTGGATCCAAGATTAGAAGGAAACTTTGATGTTGACTCTGCAAAGAAAGTCTTGGATATTGCAATGGCTTGTGTAGCAGCTGCTTCCATTAACAGGCCAGCAATGAGTTATGTTGTTGCTCAACTCAAAAAATGTTTGCCAGCTGATGATGATAATGTTGAAAATAGGATTACTGTAGTTAATCATCTGTTGCATGATTCTGACATTCATCAAAGTTTACCGGCCAGCATTATTGATATAATTAGTGGACAGAGCTCTCTAGAAAGGTAG 3012 0.3841 MGYVDDAPVAVKMLSQSSVQGYQQFQAEVKLLMRVHHRNLTSLVGYCNEGSNKALIYEYMANGNLHEHLSSGLEYLHNGCKPPIIHRDVKASNILLTENLHAKLSDFGFFGIVLLEIITGQLLISKTEERTHIVEWLRESEREVEDGGKMIGIFLLLVFQLLWNLPIIVHAQNQSGFVSIDCGLVDEASYKDETTSIYYISDASIIDTGECHNISPKYKASSLAKQFWNVRSFPERIRNCYSLKVPQGRSSKYLIRARFMYGNYDGKDSLPQFDIYLGTKWWESLVFEDPTSVITKEIIFVASSDYVHVCLVNTNKGTPFISALEIRVLDSDAYLINSMELLARYDIGLQEDKTVRYPDDVHDRIWTPYNSKDWKQINTSLAIDKESTSYNFLPLPASTVMETAAIPTNNNDNIEFNFYPKDNASAYYVYFFVAEIQKLEANQFRDFNFFVNGYLLNGSPVNLKYLQSVYYISILEKPRLEVWINRTSRSTLPPLFSAIEIYMTKNFSQSQTDQTDASAIMNVKSNYGIKRNWQGDPCIPLSYMWDGVSCSYAGSSSPRIIYLNLSSSGLTGNITSAISNLKSIEYLDLSNNSLTGSVPYFLSQLHSLRVLNLEGNQLTGAVPMQLRENSNNGMLKTSNSNKVVVPLVASLGGAFVILATAITSFFIFKRHRVASEMGNLRAYSRIKMELESNKQQFSYAEVQKITKNFKRVVGKGASGTVYHGYVGDTEVAVKMLSPSDSNSAQAYLQFQAEAKLLAVAHHKCLTPLIGYCDDGTNMALIYEYMPNGDLAYHLSGLEYLHEGCCPGVVHRDIKSKNILLTEKFRGKLADFGLAKIYPNENDTHMCTVVAGTPGYLDPLYHRSSKLSEKSDVYSFGVVLLEIITGHPAITKTEEKVHIIRLVGSMLSEREVNDVVDPRLEGNFDVDSAKKVLDIAMACVAAASINRPAMSYVVAQLKKCLPADDDNVENRITVVNHLLHDSDIHQSLPASIIDIISGQSSLER* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0247 1003 Gene3D Ribonuclease Inhibitor 517 639 IPR032675 -
Amo18g0247 1003 SMART serkin_6 707 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0247 1003 Gene3D Transferase(Phosphotransferase) domain 1 785 980 - -
Amo18g0247 1003 Pfam Leucine rich repeat 562 618 IPR001611 GO:0005515
Amo18g0247 1003 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0247 1003 Pfam Malectin-like domain 180 503 IPR024788 -
Amo18g0247 1003 PANTHER TYROSINE KINASE FAMILY PROTEIN 2 108 - -
Amo18g0247 1003 Pfam Protein kinase domain 7 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0247 1003 Pfam Protein kinase domain 710 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0247 1003 SUPERFAMILY Protein kinase-like (PK-like) 689 956 IPR011009 -
Amo18g0247 1003 ProSitePatterns Protein kinases ATP-binding region signature. 713 734 IPR017441 GO:0005524
Amo18g0247 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Amo18g0247 1003 Gene3D Transferase(Phosphotransferase) domain 1 63 158 - -
Amo18g0247 1003 SUPERFAMILY L domain-like 525 631 - -
Amo18g0247 1003 SUPERFAMILY Protein kinase-like (PK-like) 4 127 IPR011009 -
Amo18g0247 1003 PANTHER OS07G0107800 PROTEIN-RELATED 2 108 - -
Amo18g0247 1003 PANTHER OS07G0107800 PROTEIN-RELATED 159 996 - -
Amo18g0247 1003 PANTHER OS07G0107800 PROTEIN-RELATED 110 138 - -
Amo18g0247 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Amo18g0247 1003 PANTHER TYROSINE KINASE FAMILY PROTEIN 159 996 - -
Amo18g0247 1003 PANTHER TYROSINE KINASE FAMILY PROTEIN 110 138 - -
Amo18g0247 1003 Gene3D Phosphorylase Kinase; domain 1 689 784 - -
Amo18g0247 1003 ProSiteProfiles Protein kinase domain profile. 707 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g0247 1003 Gene3D Phosphorylase Kinase; domain 1 2 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0247 Amo-Chr18 3553118 3560545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0247 167 960 Receptor kinase-like Gene Family AT2G19210 46.912 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo18g0247 Malectin_like 1.1e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0247 - - gmx:100778537 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0247 18 3553118 3560545 Amo18g0247 18 3553118 3560545 ECH
Amo18g0247 18 3553118 3560545 Amo19g0380 19 5002259 5008455 PCT
Amo18g0247 18 3553118 3560545 Amo09g0316 09 3725922 3730851 PCT