Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0233 ATGGCTATTGGCAAAGAAACGATGCAACAACAACACAAGAAGGAGGAGGAGGAATTCATCTTCAAGTCCAGCCTTCCAGACATCTACATCCCCAACCACCTTCCCCTCCATTCCTACATCTTCCAGAACCTTCCGGACTTCGCCACGCGTCCCTGCCTCATCAACGCCCCAACCGGACAAGTTTTCACCTACTCCGACGTCGACCTCAAGGCCAGAAGAGTCGCCTCAGGCCTCCACAAACACGGAATCCGCCAAGGTGACGTCATCATGATCCTGCTCCCAAACTGCCCTCAATTCGTCTTCTCCTTCCTAGGCGCATCGTTCCGCGGCGCCATCGCCACCGCCGCCAACCCGTTCTTCACGGCCGCCGAGATAGCCAAGCAGGCCAAGGCCTCCAACGCCAGGCTGCTGGTAACGCAGTCCAGTTACTACGACAAGGTGAAGGACCTCCACGGCCACCTCAGCCTGGTGTTCGTGGACACTCCCCCGGAGGGGCACCTGCATTTCTCGGAGCTGGAAGAGGCCGACGAGGAAGACATCCCGGAGGTGAAGATCAGCCCGGAGGACGTGGTGGCGCTGCCGTACTCGTCGGGAACAACGGGACTGCCGAAAGGTGTGATGCTGAGTCACAGGGGGTTGGTGACGAGCGTGGGGCAGCAAGTGGACGGAGAGAACCCAAACCTTTACTATCACAGCGAGGATGTGATCATGTGCGTGCTCCCCATGTTCCACATATACTCCCTCAACTCCGTCCTGCTCTGCGGCCTCAGGGCCAAGGCTGCCATCGTCTTGATGCCCAAATTCGAGATCACTGCCTTCCTCGCCTTGGTGCAGAAGCATCGGGTCACCATTTGCCCCGTCGTGCCTCCCATCATTCTCGCCATTGCAAAGTGCCCGGATCTCCACAACTACGACCTTTCTTCCATCCGAGTCCTTAAATCCGGCGGCGCTCCCCTCGCCAAGGACCTTGAAGACACCGTCCGCCTCAAATTCCCCAACGCCAAGCTTGGGCAGGGATATGGGATGACAGAGGCTGGTCCAGTGTTAACAATGTGCTTAACATTCGCCAAAGAAGCCATAGATGGAAAACCAGGTGCATGTGGCACCGTCGTCAGAAACGCTGAGTTGAAGATTGTTGATCCTGAAACCGAAAAATCTCTCCCGAGAAATCAACCGGGTGAAATTTGTATTAGGGGCCACCAGATCATGAAAGGTTATCTAAACGATCCAGAGGCAACAGAGAGAACAATTGACAAGGAAGGGTGGTTGCACACGGGTGACATCGGTTACATCGACGACGATGATGAGCTGTTCATCGTTGATAGGCTCAAAGAATTGATCAAATACAAAGGTTTCCAAGTTGCTCCTGCTGAACTGGAAGCCCTCCTTCTCTCCCATCCTAAAATTTCTGATGTTGCTGTTGTCCCGATGAAAGATGAAGCGGCCGGTGAGGTGCCAGTTGCATTTGTCGTGAGAGCAAATGGTCACAGTGACACAACTGAGGATGAGATTAAGCAATTCGTTTCCAAACAGGTGGTGTTTTACAAGAGAATTAACCGAGTTTTCTTCGTTGATGCCATTCCCAAGTCACCCTCCGGCAAAATATTACGAAAGGATCTAAGGGCAAGGCTCGCACTACCTCTTCCAAATTGA 1653 0.536 MAIGKETMQQQHKKEEEEFIFKSSLPDIYIPNHLPLHSYIFQNLPDFATRPCLINAPTGQVFTYSDVDLKARRVASGLHKHGIRQGDVIMILLPNCPQFVFSFLGASFRGAIATAANPFFTAAEIAKQAKASNARLLVTQSSYYDKVKDLHGHLSLVFVDTPPEGHLHFSELEEADEEDIPEVKISPEDVVALPYSSGTTGLPKGVMLSHRGLVTSVGQQVDGENPNLYYHSEDVIMCVLPMFHIYSLNSVLLCGLRAKAAIVLMPKFEITAFLALVQKHRVTICPVVPPIILAIAKCPDLHNYDLSSIRVLKSGGAPLAKDLEDTVRLKFPNAKLGQGYGMTEAGPVLTMCLTFAKEAIDGKPGACGTVVRNAELKIVDPETEKSLPRNQPGEICIRGHQIMKGYLNDPEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPKISDVAVVPMKDEAAGEVPVAFVVRANGHSDTTEDEIKQFVSKQVVFYKRINRVFFVDAIPKSPSGKILRKDLRARLALPLPN* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0233 550 Gene3D - 444 545 IPR045851 -
Amo18g0233 550 Pfam AMP-binding enzyme C-terminal domain 458 534 IPR025110 -
Amo18g0233 550 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 14 545 - -
Amo18g0233 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 545 - -
Amo18g0233 550 SUPERFAMILY Acetyl-CoA synthetase-like 22 544 - -
Amo18g0233 550 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Amo18g0233 550 Gene3D - 13 443 IPR042099 -
Amo18g0233 550 CDD 4CL 30 540 - -
Amo18g0233 550 Pfam AMP-binding enzyme 49 449 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0233 Amo-Chr18 3305538 3308624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0233 6 512 Monolignol Biosynthesis Gene Families AT1G51680 69.439 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0233 K01904 - gmx:100819192 857.44