Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0213 ATGGATGCACAGCAGAGAAGAGGAGGAGGACTCGTGTCGATATCTCCATCCACGCCTCGCTCCAGCGACAAGGCAGTGCGAGATCTGCGATCTGCGGATTCCAATTCAACTAGTTTCAATAAGAATGACAAGGACAAAGGCGTCAATGTGCAGGTTCTCCTCCGATGCAGGCCGTTGAACGAAGATGAAATGAGGGTGAATACGCCTGTTGTGATTTCCTGCAATGAAGGTAGAAGGGAGGTTTCCGCTGTGCAGAATATAGCCAACAAACAGATCGATAAAACCTTCGCATTTGACAAGGTGTTTGGCCCTGCCTCTCAGCAGAAGGAACTGTATGACCAGGCTGTGTCTCCGATTGTGTATGAAGTACTTGAGGGTTATAACTGCACAATTTTTGCATATGGTCAAACGGGAACGGGGAAGACATACACAATGGAAGGAGGAGCTAGAAAGAAGAATGGCGAATTTCCGAGTGATGCTGGTGTCATCCCCAGAGCTGTGAAACAGATTTTCGATATATTGGAGGCTCAGAATGCAGAGTACAACATGAAAGTAACGTTCTTAGAGCTTTACAATGAGGAAATAACGGATCTTTTGGCCCCTGAGGAGACTGTAAAATTTGTAGATGATAAGTCTAAAAAACCTATCGCTCTAATGGAGGATGGGAAAGGGGGTGTCTTCGTTAGAGGATTAGAGGAAGAGATTGTTTGCACTGCAAATGAAATTTACAAGATATTGGAAAAAGGTTCAGCAAAAAGGCGTACTGCTGAGACTCTTCTTAACAAACAAAGTAGCCGTTCTCATTCCATTTTTTCAATCACAATTCATATTAAGGAGTGTACTCCGGAGGGTGAAGAAATGATTAAATGTGGAAAGCTAAATCTTGTGGACCTTGCAGGCTCTGAGAATATCTCTCGTTCTGGTGCAAGAGAGGGTAGAGCAAGGGAGGCTGGGGAGATAAATAAAAGTCTACTTACACTAGGTCGAGTGATTAACGCCCTTGTTGAGCACTCAGGTCACGTTCCGTATAGGGATAGCAAATTAACCAGATTGTTGAGGGATTCCTTGGGTGGTAAAACCAAGACATGCATTATTGCCACAATATCGCCTTCCATTCACTGTCTTGAAGAAACCCTTAGTACCTTGGATTATGCACATCGTGCCAAGAATATAAAGAACAAACCAGAGGTTAATCAGAAAATGATGAAATCTGCAATGATCAAGGATTTGTATTCCGAGATTGACAGACTGAAGCAAGAGGTATATGCTGCTAGAGAGAAGAATGGAATCTATATACCACGTGATCGATATCTTCACGAAGAAGCAGAGAAGAAGGCCATGGCTGAAAAGATAGAGCGCATGGAACAAGAGGCAGAGTCCAAAGATAAGCAACTAGTGGAGCTTCAAGAACTCTACCATTCTCAGCAACATTTGACTGCTGAATTAAGTGACAAACTTGAAAGAACTGAGAAAAGTCTAGAAGAAACTCAGCAGTCCTTGTTTGATCTAGAGGAAAGGCATAAACAAGCAAATGCAAAAATTAAGGAAAAGGAATATCTGATATCAAATCTCTTAAAATCAGAGAAGGCACTTGTGGAACGTGCAATTGACCTACGAGCTGAGCTTGAGAATGCTGCATCAGATGTGACAAACCTATTTTCCAAAATTGAGCGGAAGGATAAAATTGAAGAAGGAAATAGAATACTTATCCAAAAATTCCAGTCTCAGTTAGCTCAACAGCTTGAGGTGTTGCACAAGACAGTGTCAGAATCTGTAATGCATCAAGAGAAGCAACTAAAGGATATGGAGGAAGATATGCAGTCTTTTGTATCAACAAAGGCAACGGCTACCGAAGACCTTAGAATAAGGGTAGCAAAGGTGAAAAACATGTATGGCACTGGCATTAAAGCTTTGGATGATTTGGCTGAGGAGCTTAAAGGAAATAACCAGTTAACTTATGAAGACTTGAAATCTGAAGTAGCAAAGCATTCTTCTGCCTTGGAGGATCTTTTTAAAGGAATTGCCTTAGAAGCTGATTCGCTACTAAACGATCTTCAAAGTAGTCTCCACAAGCAAGAAGCCAATTTAACTGCGTATGCTAATCAACAACGGGAGGCACATGCTAGAGCAGTTGAGACTAACCGTGCAGTGTCTAAAATAACGGTGAACTTCTTTGAAACTTTAGACAAGCATGCATCCAGTCTGACCCAAATAGTGGAGGAAGCACAAGTTGATAATGATAAAAAATTATGTGAGCTTGAAAAGAAGTTTGAGGAGTGTGCTGCTTTTGAGGAAAAACAACTATTGGAGAAAGTGGCAGAAATGCTTGCAACCTCAAATGCTAGAAAGAAAAAACTGGTTCAAATGGCGGTTAATGATCTTCGCGATAGTGCAAACAGTAAAACCAGTCAGCTGCGGCAAGAAACATTAACCATGCAGGATTCCACTTCATCTGTCAAGGCAGAATGGAGAGTTCACATGGAAAAATCAGAATCAAACTACCAAGAGAATACTTCTGCTGTAGAATCTGGAAAGAAACACCTAGTTGAGGTTCTTCAAACCTGCCTCAACAAGGCCAAAGTAGGTTCGCAACAATGGAGAAAAGCTCAAGAGTCCTTGGTTAGTTTGGAGAAGAGAAATGGTGATTCAGTGGATACTATAATTAGGCGAGGAATGGAAGCTAATCAAGGCCTACGAACCCAATTCTCAAGTGCTGTATCAACAACACTCGAAGATGCAGGCACAGCTAACAAGGATATTAACTTATCGATCGATGATTCGTTGCAACTTGATCATGAAGCTTGTGAGAACCTGAACTCCATGATCGTCCCATGCTATGGAGATCTAAGAGAACTGAAGGGCGGTCATTACCACAGAATTGTAGAGATAACCGAAAATTCAGGCAAATGTCTGCTCAATGAATACACGGTGGACGAACCATCTTGTTCAACACCAAGAAAGAGACCTTTCAATTTGCCAAGCGTTTCATCCATAGAAGAACTAAGAACCCCATCGTTTGACGAACTATTGAAGTCATTTTGGGATGCAAGATCTCCAAAACAAGCAAATGGAGATGTTAAACAAATTGGGGCATACGAAGCCGCGCAATCAGTTAGAGACTCCAGGCTCCCTCTTACTGCTATTAACTAG 3150 0.4187 MDAQQRRGGGLVSISPSTPRSSDKAVRDLRSADSNSTSFNKNDKDKGVNVQVLLRCRPLNEDEMRVNTPVVISCNEGRREVSAVQNIANKQIDKTFAFDKVFGPASQQKELYDQAVSPIVYEVLEGYNCTIFAYGQTGTGKTYTMEGGARKKNGEFPSDAGVIPRAVKQIFDILEAQNAEYNMKVTFLELYNEEITDLLAPEETVKFVDDKSKKPIALMEDGKGGVFVRGLEEEIVCTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATISPSIHCLEETLSTLDYAHRAKNIKNKPEVNQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYLHEEAEKKAMAEKIERMEQEAESKDKQLVELQELYHSQQHLTAELSDKLERTEKSLEETQQSLFDLEERHKQANAKIKEKEYLISNLLKSEKALVERAIDLRAELENAASDVTNLFSKIERKDKIEEGNRILIQKFQSQLAQQLEVLHKTVSESVMHQEKQLKDMEEDMQSFVSTKATATEDLRIRVAKVKNMYGTGIKALDDLAEELKGNNQLTYEDLKSEVAKHSSALEDLFKGIALEADSLLNDLQSSLHKQEANLTAYANQQREAHARAVETNRAVSKITVNFFETLDKHASSLTQIVEEAQVDNDKKLCELEKKFEECAAFEEKQLLEKVAEMLATSNARKKKLVQMAVNDLRDSANSKTSQLRQETLTMQDSTSSVKAEWRVHMEKSESNYQENTSAVESGKKHLVEVLQTCLNKAKVGSQQWRKAQESLVSLEKRNGDSVDTIIRRGMEANQGLRTQFSSAVSTTLEDAGTANKDINLSIDDSLQLDHEACENLNSMIVPCYGDLRELKGGHYHRIVEITENSGKCLLNEYTVDEPSCSTPRKRPFNLPSVSSIEELRTPSFDELLKSFWDARSPKQANGDVKQIGAYEAAQSVRDSRLPLTAIN* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0213 1049 Pfam Kinesin motor domain 55 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo18g0213 1049 Coils Coil 407 427 - -
Amo18g0213 1049 PANTHER KINESIN-LIKE PROTEIN KIF11 1 1049 - -
Amo18g0213 1049 Coils Coil 437 471 - -
Amo18g0213 1049 MobiDBLite consensus disorder prediction 1 43 - -
Amo18g0213 1049 ProSitePatterns Kinesin motor domain signature. 291 302 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo18g0213 1049 Coils Coil 479 520 - -
Amo18g0213 1049 CDD KISc_BimC_Eg5 47 400 - -
Amo18g0213 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 431 IPR027417 -
Amo18g0213 1049 PANTHER KINESIN-LIKE PROTEIN KIN-5D 1 1049 - -
Amo18g0213 1049 SMART kinesin_4 47 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo18g0213 1049 Gene3D Kinesin motor domain 45 431 IPR036961 -
Amo18g0213 1049 Coils Coil 525 559 - -
Amo18g0213 1049 ProSiteProfiles Kinesin motor domain profile. 49 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo18g0213 1049 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo18g0213 1049 PRINTS Kinesin heavy chain signature 258 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo18g0213 1049 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo18g0213 1049 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo18g0213 1049 Coils Coil 682 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0213 Amo-Chr18 3034731 3040302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0213 49 421 Miscellaneous Gene Families AT5G06670 37.731 5.16e-66 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0213 K10398 - gmx:100816693 1822.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0213 18 3034731 3040302 Amo18g0213 18 3034731 3040302 ECH
Amo18g0213 18 3034731 3040302 Amo09g0077 09 828737 833599 hybridization