Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0208 ATGTTGCGATCGTTGGTTGCAAAACCTCACAGTTCCCAATGCTTTATCTTCAACCTCTCGCAGAAGTTACTTCACGGAAACGGCGCAGCTCAATTCCGAGCAACGCGCGCATTCACGCCGCGTTCAGTTGCCGGGGTGTCGCCGCCGTCGAAGGCGATCGTGTACGAGGAGCACGGGCAACCCGACGCGGTGACGAAGCTGGTGGAGTTTCCAGGTGTGGAAGTGAAGGAGAATGATGTGTGCGTGAAGATGCTGTGTGCTCCCATAAACCCTTCCGACATTAACAGAATACAAGGCGTGTATCCCGTCAGGCCAGAGCTACCCGCAGTTGGTGGCTACGAAGGCGTCGGAGAGGTTTACTCCGTCGGCTCTGCCGTCACTTCTCTCTCTCCTGGTGACTGGGTCATTCCTTCTCCACCGTCCTTCGGGACATGGCAGACATACATTGTGAAAGATCAGAGTGTATGGCACAAGATAGACAAGGGCGTGCCTATGGAATATTCTGCTACCATCACTGTTAATCCCTTGACTGCTTTTCTCATGCTTGAAGACGGTGTTACTTTGAGCTCAGGGGATGCAATTGTGCAAAATGGGGCTACCAGCATGGTTGGGCAGTGCGTCATTCAGCTTGCAAAATCACGCGGTATTCGCAGCATAAATATTATAAGGGACAGGGCTGGGGTTGATGAAGTGAAAGAAACTCTTAAGAATTTGGGTGCTGATCACGTTTTCACTGAGAATGAATTGGAAGTGAAGAATGTAAAGAGTTTCTTGAATGATATACCTGAACCTGCACTAGGATTCAACTGTGTTGGTGGCAATGCTGCTTCTCTGGTTCTCAAATTTTTGAGACAAGGAGGAACTATGGTGACTTATGGTGGAATGTCTAAAAGGCCTGTTACTGTCCCCACCTCAGCCTTCATATTTAAGGAACTTTCCTTGAGGGGTTTCTGGCTGCAGAAATGGTTGAGCACAGAGAAAGCTGTAGAGAGCAGAAGAATGATAGACAAGCTTTTGGGTCTTGTACATGAGGGCAAGTTAAAATACAACATGGAGCTGGCTCCTTTTAGTGATTTTAATACATCATTGGATAAGGCTCTTGGAAAACTTGGGAGCCAACCTAAACAAGTGATCAAATTCTAA 1143 0.4786 MLRSLVAKPHSSQCFIFNLSQKLLHGNGAAQFRATRAFTPRSVAGVSPPSKAIVYEEHGQPDAVTKLVEFPGVEVKENDVCVKMLCAPINPSDINRIQGVYPVRPELPAVGGYEGVGEVYSVGSAVTSLSPGDWVIPSPPSFGTWQTYIVKDQSVWHKIDKGVPMEYSATITVNPLTAFLMLEDGVTLSSGDAIVQNGATSMVGQCVIQLAKSRGIRSINIIRDRAGVDEVKETLKNLGADHVFTENELEVKNVKSFLNDIPEPALGFNCVGGNAASLVLKFLRQGGTMVTYGGMSKRPVTVPTSAFIFKELSLRGFWLQKWLSTEKAVESRRMIDKLLGLVHEGKLKYNMELAPFSDFNTSLDKALGKLGSQPKQVIKF* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0208 380 CDD ETR 50 380 - -
Amo18g0208 380 Gene3D - 172 348 - -
Amo18g0208 380 Pfam Zinc-binding dehydrogenase 203 328 IPR013149 -
Amo18g0208 380 Pfam Alcohol dehydrogenase GroES-like domain 78 139 IPR013154 -
Amo18g0208 380 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL 41 378 - -
Amo18g0208 380 SMART PKS_ER_names_mod 59 378 IPR020843 GO:0016491
Amo18g0208 380 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, MITOCHONDRIAL 41 378 - -
Amo18g0208 380 SUPERFAMILY GroES-like 51 209 IPR011032 -
Amo18g0208 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 346 IPR036291 -
Amo18g0208 380 Gene3D - 52 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0208 Amo-Chr18 2964735 2967351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g0208 K07512 - gmx:100810089 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0208 18 2964735 2967351 Amo13g0288 13 4013364 4015590 PCT
Amo13g0288 13 4013364 4015590 Amo18g0208 18 2964735 2967351 PCT