Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0177 ATGCGTTTGGTTGTATCTGACATAACTAAGGATAAGAAGGTTCTCAAGAAGACCTTGAAGGAGGAAGAGGGGTATGAACGTCCCAATGATGGAGCTGTGGTTCAAGATGGGACTGTTTTCGTGAAGAAGGGTCATGATGATGAGCAGCCATTTGAGTTTAAAATTGACGAGGAGCAAGTAATTGATGGACTTGATAAAACTGTGATGAACATGAAGAAAGGGGAAGTTGCATTGGTGACCATACATCCTGAGTATGCTTTTGGCTCATCTGGGTCAACTCAGGAATTGGCCACCGTTCCTGCCAACTCCAACGTGTACTATGAAGTTGAGCTGGTTTCCTTTGTAAAGGATCTGAATACACTAGAGAAGATAGAGGCAACTGGAAAGAAGAAGGAAGAAGGGAATGTATTGTTCAAGGCTGACAAATATGAAAGAGCATCAAAGAGATATGAAAAGAGTGCAGTACAGTTGCAAGATAAGGCTCAACATGTTCTTTTTTAA 501 0.4152 MRLVVSDITKDKKVLKKTLKEEEGYERPNDGAVVQDGTVFVKKGHDDEQPFEFKIDEEQVIDGLDKTVMNMKKGEVALVTIHPEYAFGSSGSTQELATVPANSNVYYEVELVSFVKDLNTLEKIEATGKKKEEGNVLFKADKYERASKRYEKSAVQLQDKAQHVLF* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0177 166 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 34 115 IPR001179 GO:0003755
Amo18g0177 166 SUPERFAMILY FKBP-like 5 116 - -
Amo18g0177 166 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP65 10 119 - -
Amo18g0177 166 Coils Coil 140 160 - -
Amo18g0177 166 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 112 IPR001179 GO:0003755
Amo18g0177 166 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 10 119 - -
Amo18g0177 166 Gene3D Tetratricopeptide repeat domain 116 165 IPR011990 GO:0005515
Amo18g0177 166 Gene3D - 4 115 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0177 Amo-Chr18 2610720 2611641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0177 4 153 Calmodulin-binding Proteins AT5G48570 70.303 1.75e-69 218